Variant report

Variant rs13065677
Chromosome Location chr3:52321788-52321789
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52320800-52321800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
2 chr3:52320800-52322400 Active TSS ES-WA7 Cell Line embryonic stem cell
3 chr3:52320800-52322600 Active TSS ES-I3 Cell Line embryonic stem cell
4 chr3:52320800-52322600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr3:52320800-52322600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
6 chr3:52320800-52322600 Active TSS HSMMtube muscle
7 chr3:52320800-52322800 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr3:52320800-52322800 Active TSS iPS-18 Cell Line embryonic stem cell
9 chr3:52320800-52322800 Active TSS NHLF lung
10 chr3:52321000-52321800 Flanking Active TSS Primary hematopoietic stem cells blood
11 chr3:52321000-52322000 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
12 chr3:52321000-52322600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
13 chr3:52321000-52322600 Active TSS ES-UCSF4 Cell Line embryonic stem cell
14 chr3:52321000-52322600 Active TSS Pancreatic Islets Pancreatic Islet
15 chr3:52321000-52323000 Active TSS H9 Cell Line embryonic stem cell
16 chr3:52321200-52321800 Active TSS HepG2 liver
17 chr3:52321200-52322400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr3:52321200-52322600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr3:52321200-52322600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr3:52321200-52322600 Active TSS iPS-15b Cell Line embryonic stem cell
21 chr3:52321200-52322600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr3:52321200-52322600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr3:52321200-52322600 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
24 chr3:52321200-52322600 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
25 chr3:52321200-52322600 Active TSS Aorta Aorta
26 chr3:52321200-52322600 Active TSS Duodenum Mucosa Duodenum
27 chr3:52321200-52322600 Active TSS Lung lung
28 chr3:52321200-52322600 Active TSS Ovary ovary
29 chr3:52321200-52322600 Active TSS Psoas Muscle Psoas
30 chr3:52321200-52322600 Active TSS A549 lung
31 chr3:52321200-52322600 Active TSS GM12878-XiMat blood
32 chr3:52321200-52322600 Active TSS HSMM muscle
33 chr3:52321200-52322600 Active TSS NHDF-Ad bronchial
34 chr3:52321200-52322800 Active TSS H1 Cell Line embryonic stem cell
35 chr3:52321200-52322800 Active TSS HUES6 Cell Line embryonic stem cell
36 chr3:52321200-52322800 Active TSS iPS-20b Cell Line embryonic stem cell
37 chr3:52321200-52322800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
38 chr3:52321200-52322800 Active TSS K562 blood
39 chr3:52321200-52323000 Active TSS HUES64 Cell Line embryonic stem cell
40 chr3:52321400-52321800 Active TSS Right Atrium heart
41 chr3:52321400-52322200 Transcr. at gene 5' and 3' Primary T helper naive cells fromperipheralblood blood
42 chr3:52321400-52322200 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
43 chr3:52321400-52322200 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
44 chr3:52321400-52322200 Active TSS Liver Liver
45 chr3:52321400-52322200 Active TSS Small Intestine intestine
46 chr3:52321400-52322400 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr3:52321400-52322400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
48 chr3:52321400-52322400 Active TSS Primary monocytes fromperipheralblood blood
49 chr3:52321400-52322400 Active TSS Primary B cells from peripheral blood blood
50 chr3:52321400-52322400 Active TSS Primary T helper memory cells from peripheral blood 1 blood

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