Variant report

Variant rs9855470
Chromosome Location chr3:52493275-52493276
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52490800-52499200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr3:52491200-52493400 Genic enhancers Fetal Adrenal Gland Adrenal Gland
3 chr3:52491200-52493600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr3:52491200-52498800 Strong transcription Primary T cells from cord blood blood
5 chr3:52491400-52495400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr3:52491400-52497200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr3:52491400-52500000 Strong transcription HUES48 Cell Line embryonic stem cell
8 chr3:52491400-52501600 Weak transcription Right Atrium heart
9 chr3:52491400-52502200 Strong transcription iPS-20b Cell Line embryonic stem cell
10 chr3:52491600-52493600 Strong transcription H9 Cell Line embryonic stem cell
11 chr3:52491600-52493600 Strong transcription NHLF lung
12 chr3:52491600-52493800 Genic enhancers Primary T cells fromperipheralblood blood
13 chr3:52491600-52495400 Strong transcription Fetal Lung lung
14 chr3:52491600-52496800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
15 chr3:52491600-52499600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr3:52491600-52500000 Strong transcription Fetal Intestine Large intestine
17 chr3:52491600-52500600 Strong transcription Fetal Intestine Small intestine
18 chr3:52491600-52509400 Weak transcription Small Intestine intestine
19 chr3:52491600-52528000 Strong transcription Thymus Thymus
20 chr3:52491800-52493400 Transcr. at gene 5' and 3' GM12878-XiMat blood
21 chr3:52491800-52493400 Strong transcription Hela-S3 cervix
22 chr3:52491800-52493400 Strong transcription HSMM muscle
23 chr3:52491800-52493600 Strong transcription Muscle Satellite Cultured Cells --
24 chr3:52491800-52493600 Strong transcription NH-A brain
25 chr3:52491800-52493800 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr3:52491800-52493800 Strong transcription Right Ventricle heart
27 chr3:52491800-52493800 Strong transcription HepG2 liver
28 chr3:52491800-52494000 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
29 chr3:52491800-52495000 Strong transcription Primary T helper cells PMA-I stimulated --
30 chr3:52491800-52495400 Strong transcription iPS-15b Cell Line embryonic stem cell
31 chr3:52491800-52495400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr3:52491800-52495400 Strong transcription Adipose Nuclei Adipose
33 chr3:52491800-52495400 Strong transcription Fetal Kidney kidney
34 chr3:52491800-52495400 Strong transcription Skeletal Muscle Female skeletal muscle
35 chr3:52491800-52495600 Strong transcription ES-I3 Cell Line embryonic stem cell
36 chr3:52491800-52496000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr3:52491800-52496400 Strong transcription Skeletal Muscle Male skeletal muscle
38 chr3:52491800-52496600 Strong transcription Duodenum Smooth Muscle Duodenum
39 chr3:52491800-52496800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr3:52491800-52496800 Strong transcription Brain Anterior Caudate brain
41 chr3:52491800-52497200 Strong transcription Fetal Muscle Leg muscle
42 chr3:52491800-52497200 Strong transcription Stomach Smooth Muscle stomach
43 chr3:52491800-52497400 Strong transcription H1 Cell Line embryonic stem cell
44 chr3:52491800-52497400 Strong transcription Rectal Smooth Muscle rectum
45 chr3:52491800-52498400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr3:52491800-52498600 Strong transcription Liver Liver
47 chr3:52491800-52499400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr3:52491800-52499400 Strong transcription Osteobl bone
49 chr3:52491800-52499600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr3:52491800-52500000 Strong transcription Lung lung

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