Variant report

Variant rs6445386
Chromosome Location chr3:52350212-52350213
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52327200-52351600 Weak transcription Aorta Aorta
2 chr3:52327400-52351600 Weak transcription Brain Anterior Caudate brain
3 chr3:52328200-52366000 Weak transcription Brain Angular Gyrus brain
4 chr3:52328800-52367600 Weak transcription Brain Substantia Nigra brain
5 chr3:52329200-52351600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr3:52330400-52378600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr3:52333000-52351600 Weak transcription Thymus Thymus
8 chr3:52334000-52351400 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr3:52335400-52351400 Weak transcription Placenta Amnion Placenta Amnion
10 chr3:52338400-52351400 Weak transcription Colon Smooth Muscle Colon
11 chr3:52339800-52351200 Weak transcription Right Ventricle heart
12 chr3:52342600-52351200 Weak transcription Fetal Lung lung
13 chr3:52342600-52351200 Weak transcription Pancreas Pancrea
14 chr3:52343000-52351200 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr3:52343200-52351200 Weak transcription Gastric stomach
16 chr3:52343800-52350800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
17 chr3:52344400-52351200 Weak transcription Ovary ovary
18 chr3:52344600-52351200 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr3:52344600-52378600 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr3:52344800-52351200 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr3:52344800-52351400 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr3:52345200-52351200 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr3:52345200-52351200 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr3:52345400-52351200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr3:52345400-52351200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr3:52345600-52351200 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr3:52345800-52351200 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr3:52345800-52351200 Weak transcription Fetal Intestine Large intestine
29 chr3:52345800-52351600 Weak transcription Primary neutrophils fromperipheralblood blood
30 chr3:52345800-52351600 Weak transcription Brain Hippocampus Middle brain
31 chr3:52346200-52351200 Weak transcription Primary T cells fromperipheralblood blood
32 chr3:52346400-52351400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr3:52346400-52351400 Weak transcription Primary T cells from cord blood blood
34 chr3:52347400-52350400 Enhancers HSMMtube muscle
35 chr3:52347400-52350600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr3:52347600-52351200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr3:52347800-52351200 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr3:52347800-52351200 Weak transcription Rectal Smooth Muscle rectum
39 chr3:52348000-52351200 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr3:52348000-52351200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr3:52348000-52351600 Weak transcription NHLF lung
42 chr3:52348000-52353600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr3:52348200-52351000 Strong transcription Fetal Intestine Small intestine
44 chr3:52348200-52351200 Weak transcription Primary hematopoietic stem cells blood
45 chr3:52348200-52351200 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr3:52348200-52351200 Weak transcription Stomach Smooth Muscle stomach
47 chr3:52348200-52351200 Weak transcription HMEC breast
48 chr3:52348200-52351400 Weak transcription K562 blood
49 chr3:52348200-52351400 Weak transcription NH-A brain
50 chr3:52348400-52351200 Weak transcription Colonic Mucosa Colon

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