Variant report

Variant	rs17052061
Chromosome Location	chr3:52346240-52346241
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ELF1	chr3:52345533-52346265	GM12878	blood:	n/a	n/a
2	POLR2A	chr3:52346002-52346439	HepG2	liver:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:52304279..52306605-chr3:52344812..52346956,2	K562	blood:
2	chr3:52320475..52323519-chr3:52345783..52348216,3	MCF-7	breast:
3	chr3:52340180..52343707-chr3:52344223..52347633,5	K562	blood:
4	chr3:52344151..52347249-chr3:52349398..52352929,3	K562	blood:

Variant related genes	Relation type
DNAH1	TF binding region
ENSG00000164091	Chromatin interaction
ENSG00000114841	Chromatin interaction
ENSG00000168237	Chromatin interaction

Extended variants
information (count: 126 )
Associated
traits (count: 6 )

rSNPs within LD-proxies of this variant (count:118)

rs_ID	r²[population]
rs1011062	1.00[JPT][hapmap]
rs1011063	0.94[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.85[TSI][hapmap]
rs1011064	1.00[JPT][hapmap]
rs10460962	0.83[ASW][hapmap];0.97[LWK][hapmap];0.93[YRI][hapmap];0.96[AFR][1000 genomes]
rs10461028	0.91[AFR][1000 genomes]
rs1077142	1.00[CEU][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10865972	1.00[JPT][hapmap]
rs11705963	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11706001	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11706108	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11707864	0.83[ASW][hapmap];0.86[CEU][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];0.91[MEX][hapmap];0.88[MKK][hapmap];0.94[TSI][hapmap];0.81[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs11707931	0.93[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11709658	0.86[CEU][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11710014	0.89[LWK][hapmap];0.93[YRI][hapmap];0.89[AFR][1000 genomes]
rs11711934	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];0.94[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11711974	0.83[LWK][hapmap]
rs11714402	0.83[ASW][hapmap];1.00[CEU][hapmap];1.00[JPT][hapmap];0.92[LWK][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];0.97[TSI][hapmap];0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11716017	0.86[CEU][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11718125	0.93[CEU][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];0.97[TSI][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11721286	1.00[JPT][hapmap]
rs123598	1.00[JPT][hapmap]
rs123602	0.83[ASW][hapmap];1.00[CEU][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs123603	1.00[JPT][hapmap]
rs13059674	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13060192	1.00[JPT][hapmap]
rs13071708	1.00[JPT][hapmap]
rs13075370	0.83[ASW][hapmap];0.86[CEU][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.91[MEX][hapmap];0.86[MKK][hapmap];0.94[TSI][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs13076508	1.00[JPT][hapmap]
rs13076890	0.83[ASW][hapmap];1.00[CEU][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.80[LWK][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];0.97[TSI][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13091360	1.00[JPT][hapmap]
rs13091545	0.93[CEU][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1541495	1.00[JPT][hapmap]
rs164637	1.00[JPT][hapmap]
rs17052053	0.83[ASW][hapmap];1.00[LWK][hapmap];0.93[YRI][hapmap];0.95[AFR][1000 genomes]
rs17052054	0.83[ASW][hapmap];0.94[LWK][hapmap];0.88[MKK][hapmap];0.96[YRI][hapmap];0.95[AFR][1000 genomes]
rs17052058	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17052068	1.00[ASW][hapmap];0.93[CEU][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.91[MEX][hapmap];0.98[MKK][hapmap];0.94[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2016575	0.93[CEU][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.97[TSI][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2109558	1.00[JPT][hapmap]
rs2109559	1.00[JPT][hapmap]
rs2159607	0.93[CEU][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.91[TSI][hapmap];0.81[EUR][1000 genomes]
rs2215466	1.00[JPT][hapmap]
rs2335640	1.00[ASW][hapmap];0.93[CEU][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.90[MEX][hapmap];1.00[MKK][hapmap];0.94[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs28481563	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2878549	1.00[JPT][hapmap]
rs34238085	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34261027	0.81[EUR][1000 genomes]
rs34355561	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34523877	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34551211	1.00[JPT][hapmap]
rs34762015	1.00[ASW][hapmap];0.93[CEU][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];1.00[MKK][hapmap];0.94[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs34908451	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs35133416	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs352142	1.00[JPT][hapmap]
rs352143	0.89[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.82[AMR][1000 genomes]
rs352144	1.00[JPT][hapmap]
rs352173	1.00[JPT][hapmap]
rs353548	1.00[JPT][hapmap]
rs35860312	1.00[CEU][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3733063	0.86[LWK][hapmap];0.82[YRI][hapmap]
rs3752819	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs3774409	1.00[JPT][hapmap]
rs3774410	1.00[JPT][hapmap]
rs3796343	0.93[CEU][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.91[TSI][hapmap];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs390802	1.00[CEU][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.97[TSI][hapmap];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4082828	0.80[LWK][hapmap]
rs409803	1.00[JPT][hapmap]
rs419050	1.00[JPT][hapmap]
rs419604	1.00[JPT][hapmap]
rs419752	1.00[JPT][hapmap]
rs4312651	1.00[JPT][hapmap]
rs4687614	1.00[JPT][hapmap]
rs4687617	1.00[JPT][hapmap]
rs4687618	1.00[JPT][hapmap]
rs4687619	1.00[JPT][hapmap]
rs498778	1.00[JPT][hapmap]
rs498946	1.00[CEU][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.88[TSI][hapmap];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs55965068	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55997317	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56352611	0.95[AFR][1000 genomes]
rs56357549	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs57441156	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59612757	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61150019	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs613519	1.00[JPT][hapmap]
rs634382	0.86[CEU][hapmap];1.00[JPT][hapmap];0.85[TSI][hapmap];0.81[AMR][1000 genomes]
rs6445385	0.96[YRI][hapmap];0.88[AFR][1000 genomes]
rs6445386	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6445486	1.00[JPT][hapmap]
rs6445506	1.00[JPT][hapmap]
rs66462821	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs67248391	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs676034	1.00[JPT][hapmap]
rs6763882	1.00[ASW][hapmap];0.93[CEU][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.91[MEX][hapmap];0.98[MKK][hapmap];0.94[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6771558	1.00[JPT][hapmap]
rs67834575	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6784615	1.00[JPT][hapmap]
rs6793317	0.83[LWK][hapmap]
rs6794675	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6796333	1.00[ASW][hapmap];0.93[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6800707	0.93[CEU][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]
rs6810027	1.00[JPT][hapmap]
rs728408	1.00[JPT][hapmap]
rs73088800	0.95[AFR][1000 genomes]
rs758803	1.00[JPT][hapmap]
rs7615405	0.89[AFR][1000 genomes]
rs7620015	1.00[JPT][hapmap]
rs7643570	0.91[MEX][hapmap];0.82[TSI][hapmap];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs82825	1.00[CEU][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs887514	1.00[JPT][hapmap]
rs887515	0.93[CEU][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap]
rs929528	1.00[JPT][hapmap]
rs9844183	1.00[CEU][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9846089	1.00[JPT][hapmap]
rs9855470	1.00[JPT][hapmap]
rs9861879	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9863753	1.00[JPT][hapmap]
rs9867823	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519445	chr3:52004317-52367932	Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	134 gene(s)	inside rSNPs	diseases
2	nsv470572	chr3:52123313-52350212	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	103 gene(s)	inside rSNPs	diseases
3	nsv834695	chr3:52199701-52400577	Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	98 gene(s)	inside rSNPs	diseases
4	nsv876787	chr3:52236762-52367932	Genic enhancers Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	90 gene(s)	inside rSNPs	diseases
5	nsv876788	chr3:52247110-52367932	Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	90 gene(s)	inside rSNPs	diseases
6	nsv876789	chr3:52247110-52575831	Flanking Active TSS Bivalent Enhancer Strong transcription Weak transcription Enhancers Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	117 gene(s)	inside rSNPs	diseases
7	nsv984542	chr3:52285682-52516115	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	94 gene(s)	inside rSNPs	diseases
8	nsv834696	chr3:52317478-52479537	Flanking Active TSS Active TSS Strong transcription Weak transcription Bivalent Enhancer Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	45 gene(s)	inside rSNPs	diseases

mRNA abundance (count:6)

SNP	Gene	Cis/trans	Tissue	Source
rs17052061	SEMA3G	cis	cerebellum	SCAN
rs17052061	GNAT1	cis	parietal	SCAN
rs17052061	DNAH1	cis	cerebellum	SCAN
rs17052061	ZNF589	cis	cerebellum	SCAN
rs17052061	ITIH3	cis	parietal	SCAN
rs17052061	DNAH1	cis	parietal	SCAN

Chromatin state (count:94 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:52327200-52351600	Weak transcription	Aorta	Aorta
2	chr3:52327400-52351600	Weak transcription	Brain Anterior Caudate	brain
3	chr3:52328000-52347000	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr3:52328200-52366000	Weak transcription	Brain Angular Gyrus	brain
5	chr3:52328800-52367600	Weak transcription	Brain Substantia Nigra	brain
6	chr3:52329200-52351600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
7	chr3:52330400-52378600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr3:52333000-52351600	Weak transcription	Thymus	Thymus
9	chr3:52334000-52351400	Weak transcription	Duodenum Smooth Muscle	Duodenum
10	chr3:52334200-52347400	Weak transcription	Skeletal Muscle Male	skeletal muscle
11	chr3:52334200-52349600	Weak transcription	Brain Inferior Temporal Lobe	brain
12	chr3:52334400-52347200	Weak transcription	Esophagus	oesophagus
13	chr3:52334600-52348000	Weak transcription	Stomach Smooth Muscle	stomach
14	chr3:52335000-52347600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr3:52335200-52347200	Weak transcription	Left Ventricle	heart
16	chr3:52335200-52347400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr3:52335200-52347600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr3:52335400-52351400	Weak transcription	Placenta Amnion	Placenta Amnion
19	chr3:52337400-52347200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr3:52338400-52351400	Weak transcription	Colon Smooth Muscle	Colon
21	chr3:52339400-52347400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr3:52339800-52351200	Weak transcription	Right Ventricle	heart
23	chr3:52341800-52347000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
24	chr3:52342000-52347600	Weak transcription	K562	blood
25	chr3:52342200-52347400	Weak transcription	Primary hematopoietic stem cells	blood
26	chr3:52342600-52347200	Weak transcription	Rectal Mucosa Donor 31	rectum
27	chr3:52342600-52351200	Weak transcription	Fetal Lung	lung
28	chr3:52342600-52351200	Weak transcription	Pancreas	Pancrea
29	chr3:52342800-52347400	Weak transcription	Small Intestine	intestine
30	chr3:52343000-52347400	Weak transcription	Colonic Mucosa	Colon
31	chr3:52343000-52348000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
32	chr3:52343000-52351200	Weak transcription	Sigmoid Colon	Sigmoid Colon
33	chr3:52343200-52351200	Weak transcription	Gastric	stomach
34	chr3:52343600-52346400	Strong transcription	Primary T cells from cord blood	blood
35	chr3:52343800-52350800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
36	chr3:52344000-52346400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
37	chr3:52344000-52346400	Genic enhancers	Spleen	Spleen
38	chr3:52344200-52346400	Enhancers	Primary B cells from peripheral blood	blood
39	chr3:52344200-52346600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr3:52344200-52347200	Enhancers	GM12878-XiMat	blood
41	chr3:52344200-52348600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
42	chr3:52344400-52346400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
43	chr3:52344400-52351200	Weak transcription	Ovary	ovary
44	chr3:52344600-52351200	Weak transcription	Primary T helper cells fromperipheralblood	blood
45	chr3:52344600-52378600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
46	chr3:52344800-52346600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
47	chr3:52344800-52346600	Genic enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
48	chr3:52344800-52346800	Enhancers	Cortex derived primary cultured neurospheres	brain
49	chr3:52344800-52347200	Weak transcription	Adipose Nuclei	Adipose
50	chr3:52344800-52347200	Weak transcription	Duodenum Mucosa	Duodenum

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