Variant report

Variant rs6784615
Chromosome Location chr3:52506426-52506427
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52491600-52509400 Weak transcription Small Intestine intestine
2 chr3:52491600-52528000 Strong transcription Thymus Thymus
3 chr3:52491800-52517200 Strong transcription Fetal Stomach stomach
4 chr3:52491800-52524000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr3:52491800-52527000 Strong transcription HUES64 Cell Line embryonic stem cell
6 chr3:52491800-52528200 Strong transcription Cortex derived primary cultured neurospheres brain
7 chr3:52491800-52528200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr3:52492000-52516800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr3:52492000-52517200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr3:52492400-52517400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr3:52493000-52506800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr3:52493000-52527800 Strong transcription Primary T helper cells fromperipheralblood blood
13 chr3:52493200-52507000 Strong transcription Fetal Thymus thymus
14 chr3:52495400-52507600 Weak transcription Fetal Kidney kidney
15 chr3:52498600-52527200 Strong transcription Primary T cells fromperipheralblood blood
16 chr3:52499200-52517200 Strong transcription Primary T helper naive cells fromperipheralblood blood
17 chr3:52499400-52527800 Strong transcription Primary T cells from cord blood blood
18 chr3:52499600-52529200 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr3:52499800-52507200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
20 chr3:52500200-52517000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr3:52501000-52515200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr3:52501600-52528800 Strong transcription Fetal Intestine Small intestine
23 chr3:52502800-52517200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr3:52503400-52517200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr3:52503600-52507600 Weak transcription Fetal Brain Male brain
26 chr3:52504200-52517200 Strong transcription Placenta Amnion Placenta Amnion
27 chr3:52504200-52526600 Strong transcription H9 Cell Line embryonic stem cell
28 chr3:52504200-52526800 Strong transcription iPS-20b Cell Line embryonic stem cell
29 chr3:52504200-52527400 Strong transcription HUES48 Cell Line embryonic stem cell
30 chr3:52504200-52527400 Strong transcription Primary neutrophils fromperipheralblood blood
31 chr3:52504200-52527600 Strong transcription Dnd41 blood
32 chr3:52504200-52527800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr3:52504200-52528000 Strong transcription Primary B cells from peripheral blood blood
34 chr3:52504200-52528000 Strong transcription Primary T regulatory cells fromperipheralblood blood
35 chr3:52504200-52528600 Strong transcription Brain Germinal Matrix brain
36 chr3:52504400-52506800 Genic enhancers Breast Myoepithelial Primary Cells Breast
37 chr3:52504400-52508200 Strong transcription NHLF lung
38 chr3:52504400-52508400 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr3:52504400-52517000 Strong transcription GM12878-XiMat blood
40 chr3:52504400-52517400 Strong transcription NHEK skin
41 chr3:52504400-52517600 Strong transcription iPS-18 Cell Line embryonic stem cell
42 chr3:52504400-52523600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr3:52504400-52523800 Strong transcription Rectal Mucosa Donor 29 rectum
44 chr3:52504400-52527400 Strong transcription Osteobl bone
45 chr3:52504400-52527600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr3:52504400-52527600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
47 chr3:52504400-52528000 Strong transcription Fetal Brain Female brain
48 chr3:52504600-52515800 Strong transcription Duodenum Smooth Muscle Duodenum
49 chr3:52504600-52517000 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr3:52504600-52517000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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