Variant report

Variant	rs4082828
Chromosome Location	chr3:52274742-52274743
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:185)
CpG islands
(count:0)
Chromatin interactive
region (count:12)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:185 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr3:52274427-52274931	GM12878	blood:	n/a	n/a
2	CTCF	chr3:52274660-52274810	HVMF	connective:	n/a	n/a
3	POLR2A	chr3:52273987-52275172	HL-60	blood:	n/a	n/a
4	POLR2A	chr3:52273968-52275278	Raji	blood:	n/a	n/a
5	CTCF	chr3:52274610-52274793	NHEK	skin:	n/a	n/a
6	POLR2A	chr3:52274077-52274836	GM18526	blood:	n/a	n/a
7	EP300	chr3:52274022-52275085	K562	blood:	n/a	n/a
8	KAP1	chr3:52274021-52275163	HEK293	kidney:	n/a	n/a
9	POLR2A	chr3:52274036-52275183	PANC-1	pancreas:	n/a	n/a
10	POLR2A	chr3:52272259-52275014	GM12892	blood:	n/a	n/a
11	USF1	chr3:52274634-52275056	K562	blood:	n/a	n/a
12	POLR2A	chr3:52274088-52275163	GM12891	blood:	n/a	n/a
13	POLR2A	chr3:52274548-52274811	SK-N-SH	brain:	n/a	n/a
14	NR2F2	chr3:52274560-52274953	K562	blood:	n/a	n/a
15	BHLHE40	chr3:52274707-52274780	HepG2	liver:	n/a	n/a
16	CTCF	chr3:52274620-52274770	HPAF	blood vessel:	n/a	n/a
17	RCOR1	chr3:52274578-52274743	HepG2	liver:	n/a	n/a
18	POLR2A	chr3:52274392-52274968	HL-60	blood:	n/a	n/a
19	POLR2A	chr3:52273816-52275204	U87	brain:	n/a	n/a
20	CTCF	chr3:52274640-52274790	GM12869	blood:	n/a	n/a
21	TBP	chr3:52274480-52274846	K562	blood:	n/a	n/a
22	CTCF	chr3:52274614-52274805	GM12892	blood:	n/a	n/a
23	POLR2A	chr3:52272974-52275139	PBDE	blood:	n/a	n/a
24	CTCF	chr3:52274640-52274790	GM12873	blood:	n/a	n/a
25	CTCF	chr3:52274614-52274777	GM12891	blood:	n/a	n/a
26	CTCF	chr3:52274620-52274770	AG04450	lung:	n/a	n/a
27	MTA3	chr3:52272162-52275133	GM12878	blood:	n/a	n/a
28	USF2	chr3:52274213-52274973	GM12878	blood:	n/a	n/a
29	CEBPB	chr3:52274193-52275165	IMR90	lung:	n/a	n/a
30	MAX	chr3:52273856-52275294	HCT-116	colon:	n/a	n/a
31	POLR2A	chr3:52273886-52274874	HCT-116	colon:	n/a	n/a
32	CTCF	chr3:52274600-52274750	GM12873	blood:	n/a	n/a
33	MYC	chr3:52274069-52274833	MCF10A-Er-Src	breast:	n/a	n/a
34	CTCF	chr3:52274640-52274790	HA-sp	spinal cord:	n/a	n/a
35	CTCF	chr3:52274640-52274790	HBMEC	blood vessel:	n/a	n/a
36	CTCF	chr3:52274600-52274750	RPTEC	kidney:	n/a	n/a
37	POLR2A	chr3:52273850-52274949	GM12892	blood:	n/a	n/a
38	TCF12	chr3:52274542-52274819	GM12878	blood:	n/a	n/a
39	BHLHE40	chr3:52274611-52275124	K562	blood:	n/a	n/a
40	SIN3AK20	chr3:52274575-52274907	SK-N-SH	brain:	n/a	n/a
41	HEY1	chr3:52274011-52274822	K562	blood:	n/a	n/a
42	RUNX3	chr3:52274417-52275005	GM12878	blood:	n/a	n/a
43	TCF3	chr3:52274580-52274794	GM12878	blood:	n/a	n/a
44	CTCF	chr3:52274640-52274790	HCPEpiC	choroid plexus:	n/a	n/a
45	POLR2A	chr3:52272416-52275284	PFSK-1	brain:	n/a	n/a
46	POLR2A	chr3:52271840-52275220	HepG2	liver:	n/a	n/a
47	CTCF	chr3:52274620-52274770	HEEpiC	esophagus:	n/a	n/a
48	CTCF	chr3:52274666-52274764	Hela-S3	cervix:	n/a	n/a
49	CTCF	chr3:52274640-52274790	GM06990	blood:	n/a	n/a
50	TCF12	chr3:52273947-52275199	SK-N-SH	brain:	n/a	n/a

No data

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:52272619..52275147-chr3:52443057..52446254,5	K562	blood:
2	chr3:52272390..52274822-chr3:52406008..52407949,2	K562	blood:
3	chr3:52006492..52009228-chr3:52273747..52276252,2	K562	blood:
4	chr3:52271022..52275105-chr3:52320320..52325575,6	K562	blood:
5	chr3:52271478..52274801-chr3:52443057..52446273,4	K562	blood:
6	chr3:52270811..52274971-chr3:52310538..52315239,11	K562	blood:
7	chr3:52270811..52276588-chr3:52310648..52314131,11	K562	blood:
8	chr3:52273329..52274998-chr3:52327132..52329957,2	MCF-7	breast:
9	chr3:52027463..52030131-chr3:52273399..52277503,3	K562	blood:
10	chr3:52269470..52276026-chr3:52310334..52314212,10	MCF-7	breast:
11	chr3:52269533..52276077-chr3:52310385..52313504,11	MCF-7	breast:
12	chr3:52272181..52276088-chr3:52318615..52323958,11	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PPM1M-2	chr3:52274191-52275813	NONHSAT089901

No data

Variant related genes	Relation type
TWF2	TF binding region
TLR9	TF binding region
ENSG00000239557	Chromatin interaction
ENSG00000114786	Chromatin interaction
ENSG00000248487	Chromatin interaction
ENSG00000272762	Chromatin interaction
ENSG00000162244	Chromatin interaction
ENSG00000164091	Chromatin interaction
ENSG00000207926	Chromatin interaction
ENSG00000114779	Chromatin interaction
ENSG00000010318	Chromatin interaction
ENSG00000163930	Chromatin interaction
ENSG00000168237	Chromatin interaction

Extended variants
information (count: 89 )
Associated
traits (count: 9 )

rSNPs within LD-proxies of this variant (count:76)

rs_ID	r²[population]
rs10460962	1.00[CEU][hapmap];1.00[GIH][hapmap];0.83[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10461027	1.00[CEU][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.93[EUR][1000 genomes]
rs10461028	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11706515	1.00[CEU][hapmap];0.88[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.90[EUR][1000 genomes]
rs11706541	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11707056	1.00[CEU][hapmap];1.00[GIH][hapmap];0.96[TSI][hapmap];0.96[EUR][1000 genomes]
rs11707864	0.80[LWK][hapmap]
rs11708581	0.91[CEU][hapmap];0.88[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.90[EUR][1000 genomes]
rs11708811	1.00[CEU][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.96[EUR][1000 genomes]
rs11710014	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];0.95[TSI][hapmap];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11711914	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11711934	0.81[LWK][hapmap]
rs11711974	1.00[CEU][hapmap];0.88[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11713464	0.86[AMR][1000 genomes]
rs11713914	1.00[CEU][hapmap];0.88[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.90[EUR][1000 genomes]
rs11714358	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11714402	0.83[LWK][hapmap]
rs11715208	0.96[EUR][1000 genomes]
rs11715382	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11715391	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11717028	0.93[EUR][1000 genomes]
rs11718125	0.83[ASW][hapmap];0.83[LWK][hapmap]
rs11718729	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11719760	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11720365	1.00[CEU][hapmap];0.88[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.90[EUR][1000 genomes]
rs11721277	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs13059674	0.81[LWK][hapmap]
rs13075370	0.82[LWK][hapmap]
rs17052051	1.00[CEU][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs17052052	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.80[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17052053	0.91[CEU][hapmap];0.81[LWK][hapmap];0.85[MEX][hapmap];0.96[TSI][hapmap];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs17052054	1.00[CEU][hapmap];1.00[GIH][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17052058	0.81[LWK][hapmap]
rs17052061	0.80[LWK][hapmap]
rs17052068	0.83[LWK][hapmap]
rs1767	0.91[CEU][hapmap];0.96[YRI][hapmap];0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1769	1.00[CEU][hapmap];1.00[GIH][hapmap];0.83[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2335640	0.83[LWK][hapmap]
rs34762015	0.81[LWK][hapmap]
rs35976326	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3733063	1.00[ASW][hapmap];0.91[CEU][hapmap];0.94[LWK][hapmap];0.93[MKK][hapmap];0.96[TSI][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs3886875	1.00[CEU][hapmap];0.88[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.84[EUR][1000 genomes]
rs55676974	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs55806905	0.90[EUR][1000 genomes]
rs55813842	0.90[EUR][1000 genomes]
rs55847657	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs56002041	0.90[EUR][1000 genomes]
rs56322342	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs56352611	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs56899118	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs57849650	0.90[EUR][1000 genomes]
rs58531656	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs58879205	0.86[AMR][1000 genomes]
rs60382084	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs61644644	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6445385	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6445386	0.81[LWK][hapmap]
rs6763882	0.83[LWK][hapmap]
rs6783652	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6793317	0.91[CEU][hapmap];0.97[LWK][hapmap];0.85[MEX][hapmap];0.96[TSI][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6796333	0.81[LWK][hapmap]
rs6809248	0.96[YRI][hapmap];0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73072990	0.84[EUR][1000 genomes]
rs73088773	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs73088783	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73088785	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73088791	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73088800	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73091166	0.90[EUR][1000 genomes]
rs73091168	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs746239	0.90[EUR][1000 genomes]
rs7615405	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7628461	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7633687	1.00[CEU][hapmap];0.88[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.90[EUR][1000 genomes]
rs7638204	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7643913	0.86[CEU][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519445	chr3:52004317-52367932	Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	134 gene(s)	inside rSNPs	diseases
2	nsv984541	chr3:52055970-52285682	Genic enhancers Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
3	nsv470572	chr3:52123313-52350212	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	103 gene(s)	inside rSNPs	diseases
4	nsv460537	chr3:52148233-52290550	Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
5	nsv590301	chr3:52148233-52290550	Enhancers Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
6	nsv508218	chr3:52155869-52290410	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
7	nsv834694	chr3:52178983-52335821	Flanking Active TSS Enhancers Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	102 gene(s)	inside rSNPs	diseases
8	nsv834695	chr3:52199701-52400577	Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	98 gene(s)	inside rSNPs	diseases
9	nsv876787	chr3:52236762-52367932	Genic enhancers Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	90 gene(s)	inside rSNPs	diseases
10	nsv876788	chr3:52247110-52367932	Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	90 gene(s)	inside rSNPs	diseases
11	nsv876789	chr3:52247110-52575831	Flanking Active TSS Bivalent Enhancer Strong transcription Weak transcription Enhancers Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	117 gene(s)	inside rSNPs	diseases
12	nsv876790	chr3:52261382-52286825	Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
13	nsv876791	chr3:52269491-52286825	Strong transcription Enhancers Flanking Active TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

mRNA abundance (count:9)

SNP	Gene	Cis/trans	Tissue	Source
rs4082828	TKT	cis	cerebellum	SCAN
rs4082828	PPM1M	cis	parietal	SCAN
rs4082828	NISCH	cis	parietal	SCAN
rs4082828	MST1	cis	parietal	SCAN
rs4082828	DNAH1	cis	parietal	SCAN
rs4082828	SEMA3G	cis	cerebellum	SCAN
rs4082828	DNAH1	cis	cerebellum	SCAN
rs4082828	ZNF589	cis	cerebellum	SCAN
rs4082828	PPM1M	cis	Artery Tibial	GTEx

Chromatin state (count:112 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:52273400-52274800	Flanking Active TSS	Stomach Smooth Muscle	stomach
2	chr3:52273400-52274800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
3	chr3:52273600-52275000	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
4	chr3:52273800-52274800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr3:52273800-52274800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr3:52273800-52274800	Enhancers	Liver	Liver
7	chr3:52273800-52274800	Enhancers	Colon Smooth Muscle	Colon
8	chr3:52273800-52274800	Enhancers	Left Ventricle	heart
9	chr3:52273800-52274800	Flanking Active TSS	HepG2	liver
10	chr3:52273800-52275000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr3:52273800-52275000	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
12	chr3:52273800-52275000	Enhancers	Lung	lung
13	chr3:52273800-52275000	Enhancers	Right Ventricle	heart
14	chr3:52273800-52275000	Enhancers	Spleen	Spleen
15	chr3:52273800-52275000	Flanking Active TSS	Dnd41	blood
16	chr3:52273800-52275200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr3:52273800-52275200	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
18	chr3:52273800-52275200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
19	chr3:52273800-52275400	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
20	chr3:52273800-52275400	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
21	chr3:52274000-52274800	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr3:52274000-52274800	Enhancers	Primary B cells from cord blood	blood
23	chr3:52274000-52274800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
24	chr3:52274000-52274800	Enhancers	Fetal Muscle Trunk	muscle
25	chr3:52274000-52274800	Enhancers	Pancreas	Pancrea
26	chr3:52274000-52275000	Enhancers	Primary B cells from peripheral blood	blood
27	chr3:52274000-52275000	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr3:52274000-52275000	Enhancers	Fetal Muscle Leg	muscle
29	chr3:52274000-52275000	Enhancers	Placenta	Placenta
30	chr3:52274000-52275000	Enhancers	Stomach Mucosa	stomach
31	chr3:52274000-52275000	Enhancers	NH-A	brain
32	chr3:52274000-52275200	Enhancers	HUES6 Cell Line	embryonic stem cell
33	chr3:52274000-52275200	Enhancers	Breast Myoepithelial Primary Cells	Breast
34	chr3:52274000-52275200	Enhancers	Primary neutrophils fromperipheralblood	blood
35	chr3:52274000-52275200	Flanking Active TSS	GM12878-XiMat	blood
36	chr3:52274000-52275400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
37	chr3:52274000-52275400	Enhancers	Primary monocytes fromperipheralblood	blood
38	chr3:52274000-52275400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
39	chr3:52274200-52274800	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr3:52274200-52274800	Transcr. at gene 5' and 3'	Foreskin Keratinocyte Primary Cells skin02	Skin
41	chr3:52274200-52274800	Transcr. at gene 5' and 3'	NHEK	skin
42	chr3:52274200-52275000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
43	chr3:52274200-52275000	Transcr. at gene 5' and 3'	Primary hematopoietic stem cells short term culture	blood
44	chr3:52274200-52275000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr3:52274200-52275000	Enhancers	Brain Cingulate Gyrus	brain
46	chr3:52274200-52275200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
47	chr3:52274200-52275200	Enhancers	HUES48 Cell Line	embryonic stem cell
48	chr3:52274200-52275200	Enhancers	HUES64 Cell Line	embryonic stem cell
49	chr3:52274200-52275200	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
50	chr3:52274200-52275200	Enhancers	Brain Hippocampus Middle	brain

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