Variant report

Variant	rs11707056
Chromosome Location	chr3:52321976-52321977
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr3:52321890-52322223	K562	blood:	n/a	n/a
2	YY1	chr3:52321811-52322187	A549	lung:	n/a	n/a
3	PAX5	chr3:52321815-52322013	GM12878	blood:	n/a	n/a
4	CEBPD	chr3:52321930-52322182	HepG2	liver:	n/a	n/a
5	SIX5	chr3:52321826-52322219	A549	lung:	n/a	n/a
6	GABPA	chr3:52321269-52322556	MCF-7	breast:	n/a	n/a
7	PAX5	chr3:52321658-52322106	GM12878	blood:	n/a	n/a
8	POLR2A	chr3:52320943-52322630	K562	blood:	n/a	n/a
9	GABPA	chr3:52321464-52322342	A549	lung:	n/a	n/a
10	POLR2A	chr3:52321475-52322383	HCT-116	colon:	n/a	n/a
11	TAF1	chr3:52321556-52322219	GM12891	blood:	n/a	n/a
12	ATF2	chr3:52321439-52322322	H1-hESC	embryonic stem cell:	n/a	n/a
13	EP300	chr3:52321646-52322163	GM12878	blood:	n/a	chr3:52321864-52321880 chr3:52321876-52321892 chr3:52322048-52322055 chr3:52321815-52321822
14	CREB1	chr3:52321605-52322266	HepG2	liver:	n/a	chr3:52322038-52322051
15	GTF2F1	chr3:52321658-52322186	H1-hESC	embryonic stem cell:	n/a	n/a
16	MXI1	chr3:52321624-52322226	Hela-S3	cervix:	n/a	n/a
17	TAF1	chr3:52321551-52322149	PFSK-1	brain:	n/a	n/a
18	SPI1	chr3:52321707-52322200	GM12878	blood:	n/a	n/a
19	ELF1	chr3:52321476-52322470	MCF-7	breast:	n/a	chr3:52321814-52321825 chr3:52322074-52322085 chr3:52321815-52321824
20	TCF3	chr3:52321658-52322135	GM12878	blood:	n/a	n/a
21	CHD2	chr3:52321830-52322101	H1-hESC	embryonic stem cell:	n/a	n/a
22	POLR2A	chr3:52320929-52322338	ECC-1	luminal epithelium:	n/a	n/a
23	CTCF	chr3:52321920-52322070	SAEC	small airway:	n/a	n/a
24	YY1	chr3:52321729-52322241	GM12892	blood:	n/a	chr3:52321788-52321799
25	CTCF	chr3:52321900-52322050	HMEC	breast:	n/a	n/a
26	EGR1	chr3:52321641-52322124	GM12878	blood:	n/a	chr3:52322047-52322056 chr3:52321814-52321823 chr3:52321801-52321816 chr3:52321829-52321844
27	BRCA1	chr3:52321777-52322134	GM12878	blood:	n/a	n/a
28	ARID3A	chr3:52321654-52322143	HepG2	liver:	n/a	n/a
29	EGR1	chr3:52321560-52322214	MCF-7	breast:	n/a	chr3:52322047-52322056 chr3:52321814-52321823 chr3:52321801-52321816 chr3:52321829-52321844
30	POLR2A	chr3:52320859-52322348	GM12891	blood:	n/a	n/a
31	FOXM1	chr3:52321519-52322198	GM12878	blood:	n/a	n/a
32	NFIC	chr3:52321813-52322314	HepG2	liver:	n/a	n/a
33	ETS1	chr3:52321489-52322331	GM12878	blood:	n/a	chr3:52322047-52322056 chr3:52321811-52321827 chr3:52321816-52321825 chr3:52321814-52321823 chr3:52321814-52321823 chr3:52321814-52321823 chr3:52322074-52322083 chr3:52322045-52322055 chr3:52321812-52321823 chr3:52322047-52322056 chr3:52322047-52322056 chr3:52321814-52321823 chr3:52321814-52321823 chr3:52322047-52322056 chr3:52322049-52322058 chr3:52321848-52321855 chr3:52322047-52322056
34	YY1	chr3:52321808-52322185	K562	blood:	n/a	n/a
35	ELK4	chr3:52321590-52322258	Hela-S3	cervix:	n/a	chr3:52322047-52322056 chr3:52321814-52321823
36	GATA3	chr3:52321582-52322293	A549	lung:	n/a	n/a
37	EBF1	chr3:52321616-52322206	GM12878	blood:	n/a	n/a
38	YY1	chr3:52321913-52322102	K562	blood:	n/a	n/a
39	ELF1	chr3:52321474-52322335	HCT-116	colon:	n/a	chr3:52321814-52321825 chr3:52322074-52322085 chr3:52321815-52321824
40	RELA	chr3:52321573-52322280	GM10847	blood:	n/a	n/a
41	ELF1	chr3:52321623-52322317	MCF-7	breast:	n/a	chr3:52321814-52321825 chr3:52322074-52322085 chr3:52321815-52321824
42	TCF12	chr3:52321464-52322351	ECC-1	luminal epithelium:	n/a	n/a
43	IRF1	chr3:52321523-52322346	K562	blood:	n/a	chr3:52321825-52321839
44	SPI1	chr3:52321632-52322223	GM12891	blood:	n/a	n/a
45	POLR2A	chr3:52321407-52322298	GM18526	blood:	n/a	n/a
46	MAX	chr3:52321642-52322207	Hela-S3	cervix:	n/a	n/a
47	BCL3	chr3:52321783-52322305	A549	lung:	n/a	chr3:52321814-52321823 chr3:52321872-52321885 chr3:52322047-52322056
48	JUND	chr3:52321577-52322238	K562	blood:	n/a	chr3:52322040-52322049
49	GABPA	chr3:52321648-52322167	GM12878	blood:	n/a	n/a
50	POLR2A	chr3:52321517-52322235	HUVEC	blood vessel:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:52321932-52321982	HRE	kidney:	n/a
2	chr3:52321932-52321982	NB4	blood:	n/a
3	chr3:52321932-52321982	Caco-2	colon:	n/a
4	chr3:52321932-52321982	A549	lung:	n/a
5	chr3:52321932-52321982	HCT-116	colon:	n/a
6	chr3:52321932-52321982	NHDF-neo	bronchial:	n/a
7	chr3:52321932-52321982	MCF10A-Er-Src	breast:	n/a
8	chr3:52321932-52321982	MCF-7	breast:	n/a
9	chr3:52321932-52321982	Jurkat	blood:	n/a
10	chr3:52321932-52321982	BE2_C	brain:	n/a
11	chr3:52321932-52321982	PFSK-1	brain:	n/a
12	chr3:52321932-52321982	HNPCEpiC	eye:	n/a
13	chr3:52321932-52321982	ECC-1	luminal epithelium:	n/a
14	chr3:52321932-52321982	AG10803	skin:	n/a
15	chr3:52321932-52321982	HEEpiC	esophagus:	n/a
16	chr3:52321932-52321982	U87	brain:	n/a
17	chr3:52321932-52321982	HepG2	liver:	n/a
18	chr3:52321932-52321982	RPTEC	kidney:	n/a
19	chr3:52321932-52321982	PrEC	prostate:	n/a
20	chr3:52321932-52321982	AG04449	skin:	fetal
21	chr3:52321932-52321982	T-47D	breast:	n/a
22	chr3:52321932-52321982	Hela-S3	cervix:	n/a
23	chr3:52321932-52321982	HCF	heart:	n/a
24	chr3:52321932-52321982	GM12878	blood:	n/a
25	chr3:52321932-52321982	GM06990	blood:	n/a
26	chr3:52321932-52321982	HMEC	breast:	n/a
27	chr3:52321932-52321982	NH-A	brain:	n/a
28	chr3:52321932-52321982	HRPEpiC	eye:	n/a
29	chr3:52321932-52321982	HIPEpiC	eye:	n/a
30	chr3:52321932-52321982	AoSMC	blood vessel:	n/a
31	chr3:52321932-52321982	AG09319	gingival:	n/a
32	chr3:52321932-52321982	NT2-D1	testis:	n/a
33	chr3:52321932-52321982	HUVEC	blood vessel:	n/a
34	chr3:52321932-52321982	BJ	skin:	n/a
35	chr3:52321932-52321982	SK-N-SH_RA	brain:	n/a
36	chr3:52321932-52321982	HAEpiC	amniotic membrane:	n/a
37	chr3:52321932-52321982	GM19239	blood:	n/a
38	chr3:52321932-52321982	HRCEpiC	kidney:	n/a
39	chr3:52321932-52321982	K562	blood:	n/a
40	chr3:52321932-52321982	HL-60	blood:	n/a
41	chr3:52321932-52321982	HPAEpiC	pulmonary alveolar:	n/a
42	chr3:52321932-52321982	SK-N-MC	brain:	n/a
43	chr3:52321932-52321982	SAEC	small airway:	n/a
44	chr3:52321932-52321982	LNCaP	prostate:	n/a
45	chr3:52321932-52321982	HEK293	kidney:	embryo
46	chr3:52321932-52321982	NHBE	bronchial:	n/a
47	chr3:52321932-52321982	H1-hESC	embryonic stem cell:	embryo
48	chr3:52321932-52321982	IMR90	lung:	fetal
49	chr3:52321932-52321982	SK-N-SH	brain:	n/a
50	chr3:52321932-52321982	GM12892	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr19:13875307..13875848-chr3:52321209..52322123,2	Hela-S3	cervix:
2	chr3:52272181..52276088-chr3:52318615..52323958,11	MCF-7	breast:
3	chr3:52321086..52323733-chr3:52324166..52327461,5	MCF-7	breast:
4	chr3:52321502..52322345-chr6:2245845..2246762,2	Hela-S3	cervix:
5	chr11:62608856..62609653-chr3:52321247..52322510,4	Hela-S3	cervix:
6	chr11:61734617..61735587-chr3:52321317..52322130,2	Hela-S3	cervix:
7	chr1:91486993..91487505-chr3:52321844..52322675,2	HCT-116	colon:
8	chr3:52321755..52323526-chr3:52405745..52408434,2	K562	blood:
9	chr3:52271022..52275105-chr3:52320320..52325575,6	K562	blood:
10	chr3:52262890..52265555-chr3:52320474..52321976,2	MCF-7	breast:
11	chr3:52310660..52314319-chr3:52321399..52324807,9	K562	blood:
12	chr3:52321744..52323842-chr3:52332822..52334732,2	MCF-7	breast:
13	chr3:52321768..52324071-chr3:52488633..52490328,2	K562	blood:
14	chr3:52187595..52189186-chr3:52321663..52323180,2	MCF-7	breast:
15	chr3:52278070..52281652-chr3:52320199..52323338,4	MCF-7	breast:
16	chr12:52447185..52447827-chr3:52321224..52322089,2	Hela-S3	cervix:
17	chr3:52311051..52315983-chr3:52317623..52323290,10	MCF-7	breast:
18	chr3:52271015..52274727-chr3:52321912..52324165,4	K562	blood:
19	chr3:52318594..52322784-chr3:52322985..52327026,4	MCF-7	breast:
20	chr10:75910494..75911172-chr3:52321735..52322598,2	NB4	blood:

Variant related genes	Relation type
GLYCTK	TF binding region
GLYCTK	CpG island
ENSG00000037757	Chromatin interaction
ENSG00000122482	Chromatin interaction
ENSG00000133316	Chromatin interaction
ENSG00000168237	Chromatin interaction
ENSG00000185009	Chromatin interaction
ENSG00000173366	Chromatin interaction
ENSG00000250903	Chromatin interaction
ENSG00000269089	Chromatin interaction
ENSG00000010322	Chromatin interaction
ENSG00000164088	Chromatin interaction
ENSG00000112699	Chromatin interaction
ENSG00000242797	Chromatin interaction
ENSG00000247596	Chromatin interaction
ENSG00000123358	Chromatin interaction
ENSG00000164087	Chromatin interaction
ENSG00000243224	Chromatin interaction
ENSG00000156110	Chromatin interaction
ENSG00000239732	Chromatin interaction
ENSG00000239557	Chromatin interaction
ENSG00000164091	Chromatin interaction
ENSG00000167996	Chromatin interaction

Extended variants
information (count: 75 )
Associated
traits (count: 8 )

rSNPs within LD-proxies of this variant (count:66)

rs_ID	r²[population]
rs10460962	1.00[CEU][hapmap];1.00[GIH][hapmap];0.96[TSI][hapmap];0.97[EUR][1000 genomes]
rs10461027	1.00[CEU][hapmap];1.00[GIH][hapmap];0.96[TSI][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10461028	0.91[EUR][1000 genomes]
rs10865971	1.00[CEU][hapmap];0.88[GIH][hapmap];0.91[TSI][hapmap];0.83[EUR][1000 genomes]
rs11706515	1.00[CEU][hapmap];0.88[GIH][hapmap];0.92[LWK][hapmap];0.91[MKK][hapmap];0.96[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11706541	0.93[EUR][1000 genomes]
rs11708581	0.91[CEU][hapmap];0.88[GIH][hapmap];0.96[TSI][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11708811	1.00[CEU][hapmap];1.00[GIH][hapmap];0.91[MKK][hapmap];0.96[TSI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11710014	1.00[CEU][hapmap];1.00[GIH][hapmap];0.91[TSI][hapmap];0.97[EUR][1000 genomes]
rs11711914	0.94[EUR][1000 genomes]
rs11711974	1.00[CEU][hapmap];0.88[GIH][hapmap];0.96[TSI][hapmap];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11713914	1.00[CEU][hapmap];0.88[GIH][hapmap];0.85[LWK][hapmap];0.82[MKK][hapmap];0.96[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11714358	1.00[EUR][1000 genomes]
rs11715208	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11715382	0.91[EUR][1000 genomes]
rs11715391	1.00[CEU][hapmap];1.00[GIH][hapmap];0.96[TSI][hapmap];0.97[EUR][1000 genomes]
rs11716487	1.00[CEU][hapmap];0.84[TSI][hapmap]
rs11717028	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11718729	0.96[EUR][1000 genomes]
rs11719760	0.93[EUR][1000 genomes]
rs11720365	1.00[CEU][hapmap];0.88[GIH][hapmap];0.91[MKK][hapmap];0.96[TSI][hapmap];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11721277	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17052051	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs17052052	1.00[CEU][hapmap];1.00[GIH][hapmap];0.96[TSI][hapmap];0.98[EUR][1000 genomes]
rs17052053	0.91[CEU][hapmap];0.91[TSI][hapmap];0.96[EUR][1000 genomes]
rs17052054	1.00[CEU][hapmap];1.00[GIH][hapmap];0.96[TSI][hapmap];1.00[EUR][1000 genomes]
rs17263770	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs1767	0.91[CEU][hapmap];0.96[EUR][1000 genomes]
rs1769	1.00[CEU][hapmap];1.00[GIH][hapmap];0.95[TSI][hapmap];1.00[EUR][1000 genomes]
rs35976326	1.00[EUR][1000 genomes]
rs3733063	0.91[CEU][hapmap];0.91[TSI][hapmap];0.96[EUR][1000 genomes]
rs3886875	1.00[CEU][hapmap];0.88[GIH][hapmap];0.96[TSI][hapmap];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4082828	1.00[CEU][hapmap];1.00[GIH][hapmap];0.96[TSI][hapmap];0.96[EUR][1000 genomes]
rs55676974	1.00[EUR][1000 genomes]
rs55806905	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs55813842	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs55847657	0.96[EUR][1000 genomes]
rs56002041	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs56322342	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs56352611	0.96[EUR][1000 genomes]
rs56899118	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs57849650	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs58531656	0.96[EUR][1000 genomes]
rs60382084	0.96[EUR][1000 genomes]
rs61644644	1.00[EUR][1000 genomes]
rs6445385	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs6776759	0.81[EUR][1000 genomes]
rs6783652	1.00[EUR][1000 genomes]
rs6793317	0.91[CEU][hapmap];0.91[TSI][hapmap];0.96[EUR][1000 genomes]
rs6809248	0.96[EUR][1000 genomes]
rs724801	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs729555	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs73072990	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73088773	0.97[EUR][1000 genomes]
rs73088783	0.96[EUR][1000 genomes]
rs73088785	0.96[EUR][1000 genomes]
rs73088791	1.00[EUR][1000 genomes]
rs73088800	0.96[EUR][1000 genomes]
rs73091166	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs73091168	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs746239	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7615405	0.97[EUR][1000 genomes]
rs7628461	1.00[CEU][hapmap];1.00[GIH][hapmap];0.96[TSI][hapmap];0.96[EUR][1000 genomes]
rs7633687	1.00[CEU][hapmap];0.88[GIH][hapmap];0.91[MKK][hapmap];0.96[TSI][hapmap];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7638204	1.00[CEU][hapmap];1.00[GIH][hapmap];0.96[TSI][hapmap];0.97[EUR][1000 genomes]
rs7643913	0.86[CEU][hapmap];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519445	chr3:52004317-52367932	Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	134 gene(s)	inside rSNPs	diseases
2	nsv470572	chr3:52123313-52350212	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	103 gene(s)	inside rSNPs	diseases
3	nsv834694	chr3:52178983-52335821	Flanking Active TSS Enhancers Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	102 gene(s)	inside rSNPs	diseases
4	nsv834695	chr3:52199701-52400577	Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	98 gene(s)	inside rSNPs	diseases
5	nsv876787	chr3:52236762-52367932	Genic enhancers Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	90 gene(s)	inside rSNPs	diseases
6	nsv876788	chr3:52247110-52367932	Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	90 gene(s)	inside rSNPs	diseases
7	nsv876789	chr3:52247110-52575831	Flanking Active TSS Bivalent Enhancer Strong transcription Weak transcription Enhancers Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	117 gene(s)	inside rSNPs	diseases
8	nsv984542	chr3:52285682-52516115	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	94 gene(s)	inside rSNPs	diseases
9	nsv834696	chr3:52317478-52479537	Flanking Active TSS Active TSS Strong transcription Weak transcription Bivalent Enhancer Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	45 gene(s)	inside rSNPs	diseases

mRNA abundance (count:8)

SNP	Gene	Cis/trans	Tissue	Source
rs11707056	MST1	cis	parietal	SCAN
rs11707056	TKT	cis	cerebellum	SCAN
rs11707056	PPM1M	cis	parietal	SCAN
rs11707056	DNAH1	cis	parietal	SCAN
rs11707056	DNAH1	cis	cerebellum	SCAN
rs11707056	NISCH	cis	parietal	SCAN
rs11707056	SEMA3G	cis	cerebellum	SCAN
rs11707056	ZNF589	cis	cerebellum	SCAN

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:52320800-52322400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
2	chr3:52320800-52322600	Active TSS	ES-I3 Cell Line	embryonic stem cell
3	chr3:52320800-52322600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr3:52320800-52322600	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr3:52320800-52322600	Active TSS	HSMMtube	muscle
6	chr3:52320800-52322800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr3:52320800-52322800	Active TSS	iPS-18 Cell Line	embryonic stem cell
8	chr3:52320800-52322800	Active TSS	NHLF	lung
9	chr3:52321000-52322000	Transcr. at gene 5' and 3'	Skeletal Muscle Male	skeletal muscle
10	chr3:52321000-52322600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
11	chr3:52321000-52322600	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
12	chr3:52321000-52322600	Active TSS	Pancreatic Islets	Pancreatic Islet
13	chr3:52321000-52323000	Active TSS	H9 Cell Line	embryonic stem cell
14	chr3:52321200-52322400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr3:52321200-52322600	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr3:52321200-52322600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr3:52321200-52322600	Active TSS	iPS-15b Cell Line	embryonic stem cell
18	chr3:52321200-52322600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr3:52321200-52322600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr3:52321200-52322600	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr3:52321200-52322600	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
22	chr3:52321200-52322600	Active TSS	Aorta	Aorta
23	chr3:52321200-52322600	Active TSS	Duodenum Mucosa	Duodenum
24	chr3:52321200-52322600	Active TSS	Lung	lung
25	chr3:52321200-52322600	Active TSS	Ovary	ovary
26	chr3:52321200-52322600	Active TSS	Psoas Muscle	Psoas
27	chr3:52321200-52322600	Active TSS	A549	lung
28	chr3:52321200-52322600	Active TSS	GM12878-XiMat	blood
29	chr3:52321200-52322600	Active TSS	HSMM	muscle
30	chr3:52321200-52322600	Active TSS	NHDF-Ad	bronchial
31	chr3:52321200-52322800	Active TSS	H1 Cell Line	embryonic stem cell
32	chr3:52321200-52322800	Active TSS	HUES6 Cell Line	embryonic stem cell
33	chr3:52321200-52322800	Active TSS	iPS-20b Cell Line	embryonic stem cell
34	chr3:52321200-52322800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
35	chr3:52321200-52322800	Active TSS	K562	blood
36	chr3:52321200-52323000	Active TSS	HUES64 Cell Line	embryonic stem cell
37	chr3:52321400-52322200	Transcr. at gene 5' and 3'	Primary T helper naive cells fromperipheralblood	blood
38	chr3:52321400-52322200	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
39	chr3:52321400-52322200	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
40	chr3:52321400-52322200	Active TSS	Liver	Liver
41	chr3:52321400-52322200	Active TSS	Small Intestine	intestine
42	chr3:52321400-52322400	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
43	chr3:52321400-52322400	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
44	chr3:52321400-52322400	Active TSS	Primary monocytes fromperipheralblood	blood
45	chr3:52321400-52322400	Active TSS	Primary B cells from peripheral blood	blood
46	chr3:52321400-52322400	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
47	chr3:52321400-52322400	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
48	chr3:52321400-52322400	Active TSS	Fetal Intestine Large	intestine
49	chr3:52321400-52322400	Active TSS	Fetal Intestine Small	intestine
50	chr3:52321400-52322400	Active TSS	Placenta Amnion	Placenta Amnion

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