Variant report

Variant	rs17052053
Chromosome Location	chr3:52334593-52334594
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr3:52327536-52335341	HepG2	liver:	n/a	n/a
2	MYC	chr3:52334139-52334909	K562	blood:	n/a	n/a
3	ATF1	chr3:52334137-52334960	K562	blood:	n/a	n/a
4	ZBTB7A	chr3:52334101-52334598	K562	blood:	n/a	n/a
5	MAX	chr3:52334117-52334604	K562	blood:	n/a	n/a
6	POLR2A	chr3:52334511-52334835	MCF10A-Er-Src	breast:	n/a	n/a
7	POLR2A	chr3:52326828-52335551	HepG2	liver:	n/a	n/a
8	EP300	chr3:52334068-52334951	K562	blood:	n/a	n/a
9	MYC	chr3:52334054-52334623	K562	blood:	n/a	n/a
10	TBL1XR1	chr3:52333754-52334842	K562	blood:	n/a	n/a
11	TEAD4	chr3:52333972-52335041	K562	blood:	n/a	n/a
12	ZMIZ1	chr3:52334108-52334662	K562	blood:	n/a	n/a
13	NR2F2	chr3:52334019-52334766	K562	blood:	n/a	n/a
14	EBF1	chr3:52333965-52334615	GM12878	blood:	n/a	n/a
15	MAZ	chr3:52333677-52334631	K562	blood:	n/a	n/a
16	POLR2A	chr3:52330489-52334598	HepG2	liver:	n/a	n/a
17	POLR2A	chr3:52334021-52334621	K562	blood:	n/a	n/a
18	MXI1	chr3:52334179-52334883	K562	blood:	n/a	n/a
19	POLR2A	chr3:52333759-52334607	GM12892	blood:	n/a	n/a
20	HDAC2	chr3:52334011-52334615	K562	blood:	n/a	chr3:52334340-52334349
21	RCOR1	chr3:52334187-52334938	K562	blood:	n/a	n/a
22	CUX1	chr3:52334139-52335042	K562	blood:	n/a	n/a
23	JUN	chr3:52333888-52335164	K562	blood:	n/a	chr3:52335096-52335105
24	MTA3	chr3:52333136-52334687	GM12878	blood:	n/a	n/a
25	BHLHE40	chr3:52334072-52334891	K562	blood:	n/a	n/a
26	MAZ	chr3:52333959-52334850	GM12878	blood:	n/a	n/a
27	JUND	chr3:52333872-52335486	SK-N-SH	brain:	n/a	chr3:52335096-52335105
28	IRF1	chr3:52334134-52334877	K562	blood:	n/a	n/a
29	RCOR1	chr3:52334037-52334954	K562	blood:	n/a	n/a
30	GATA1	chr3:52334045-52334748	PBDE	blood:	n/a	chr3:52334341-52334348 chr3:52334342-52334359 chr3:52334400-52334408 chr3:52334340-52334350 chr3:52334152-52334159 chr3:52334341-52334348 chr3:52334334-52334355 chr3:52334341-52334348
31	JUND	chr3:52334039-52335065	K562	blood:	n/a	n/a
32	MAFK	chr3:52334177-52334666	K562	blood:	n/a	n/a
33	NR2F2	chr3:52334113-52334679	K562	blood:	n/a	n/a
34	MYC	chr3:52334114-52334709	K562	blood:	n/a	n/a
35	MAZ	chr3:52334088-52334597	HepG2	liver:	n/a	n/a
36	ARID3A	chr3:52334265-52334616	K562	blood:	n/a	n/a
37	POLR2A	chr3:52333580-52334685	K562	blood:	n/a	n/a
38	TAL1	chr3:52334056-52334949	K562	blood:	n/a	chr3:52334341-52334359
39	CCNT2	chr3:52334028-52334595	K562	blood:	n/a	chr3:52334339-52334359
40	UBTF	chr3:52334009-52334637	K562	blood:	n/a	n/a
41	FOSL2	chr3:52334538-52335113	SK-N-SH	brain:	n/a	chr3:52335096-52335105
42	POLR2A	chr3:52334445-52334678	MCF10A-Er-Src	breast:	n/a	n/a
43	MAX	chr3:52334022-52334633	K562	blood:	n/a	n/a
44	POLR2A	chr3:52333669-52334667	K562	blood:	n/a	n/a
45	TEAD4	chr3:52334103-52334682	K562	blood:	n/a	n/a
46	POLR2A	chr3:52333652-52334637	GM12892	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:52328227..52330124-chr3:52332267..52334731,2	MCF-7	breast:
2	chr3:52321744..52323842-chr3:52332822..52334732,2	MCF-7	breast:
3	chr3:52334304..52337060-chr3:52343020..52346051,4	K562	blood:
4	chr3:52324601..52327389-chr3:52333831..52335599,2	MCF-7	breast:

Variant related genes	Relation type
GLYCTK-AS1	TF binding region
ENSG00000168237	Chromatin interaction
ENSG00000207926	Chromatin interaction
ENSG00000164091	Chromatin interaction

Extended variants
information (count: 103 )
Associated
traits (count: 12 )

rSNPs within LD-proxies of this variant (count:94)

rs_ID	r²[population]
rs10460962	1.00[ASW][hapmap];0.91[CEU][hapmap];0.97[LWK][hapmap];0.85[MEX][hapmap];1.00[MKK][hapmap];0.96[TSI][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10461027	0.91[CEU][hapmap];0.96[TSI][hapmap];0.93[EUR][1000 genomes]
rs10461028	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10865971	0.91[CEU][hapmap];0.91[TSI][hapmap]
rs11706001	0.82[AFR][1000 genomes]
rs11706515	0.91[CEU][hapmap];0.96[TSI][hapmap];0.90[EUR][1000 genomes]
rs11706541	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11707056	0.91[CEU][hapmap];0.91[TSI][hapmap];0.96[EUR][1000 genomes]
rs11707864	0.89[LWK][hapmap]
rs11707931	0.93[YRI][hapmap];0.92[AFR][1000 genomes]
rs11708581	0.83[CEU][hapmap];0.96[TSI][hapmap];0.90[EUR][1000 genomes]
rs11708811	0.91[CEU][hapmap];0.96[TSI][hapmap];0.96[EUR][1000 genomes]
rs11710014	0.94[ASW][hapmap];0.91[CEU][hapmap];0.89[LWK][hapmap];0.85[MEX][hapmap];0.91[TSI][hapmap];0.93[YRI][hapmap];0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11711914	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11711934	0.83[ASW][hapmap];1.00[LWK][hapmap];0.93[YRI][hapmap];0.93[AFR][1000 genomes]
rs11711974	0.91[CEU][hapmap];0.84[LWK][hapmap];0.85[MEX][hapmap];0.96[TSI][hapmap];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11713914	0.91[CEU][hapmap];0.96[TSI][hapmap];0.90[EUR][1000 genomes]
rs11714313	1.00[CHD][hapmap];0.86[GIH][hapmap];0.82[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs11714358	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11714402	0.92[LWK][hapmap]
rs11715208	0.96[EUR][1000 genomes]
rs11715382	0.87[EUR][1000 genomes]
rs11715391	0.91[CEU][hapmap];0.85[MEX][hapmap];0.96[TSI][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11716487	0.91[CEU][hapmap];0.84[TSI][hapmap]
rs11717028	0.93[EUR][1000 genomes]
rs11717574	1.00[CHD][hapmap];0.86[GIH][hapmap];0.86[MEX][hapmap];0.82[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs11718125	0.86[LWK][hapmap]
rs11718729	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11719760	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11720365	0.91[CEU][hapmap];0.96[TSI][hapmap];0.90[EUR][1000 genomes]
rs11721277	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs13059674	0.83[ASW][hapmap];1.00[LWK][hapmap];0.93[YRI][hapmap];0.96[AFR][1000 genomes]
rs13075370	0.86[LWK][hapmap]
rs13076890	0.81[LWK][hapmap]
rs17052051	1.00[CEU][hapmap];0.81[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17052052	0.91[CEU][hapmap];0.85[MEX][hapmap];0.96[TSI][hapmap];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17052054	1.00[ASW][hapmap];0.91[CEU][hapmap];0.94[LWK][hapmap];0.85[MEX][hapmap];0.88[MKK][hapmap];0.96[TSI][hapmap];0.96[YRI][hapmap];0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17052058	0.83[ASW][hapmap];1.00[LWK][hapmap];0.88[MKK][hapmap];0.96[YRI][hapmap];0.95[AFR][1000 genomes]
rs17052061	0.83[ASW][hapmap];1.00[LWK][hapmap];0.93[YRI][hapmap];0.95[AFR][1000 genomes]
rs17052068	0.83[ASW][hapmap];0.97[LWK][hapmap];0.93[YRI][hapmap];0.95[AFR][1000 genomes]
rs1767	1.00[CEU][hapmap];0.82[YRI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1769	0.90[CEU][hapmap];0.85[MEX][hapmap];0.95[TSI][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2335640	0.83[ASW][hapmap];0.97[LWK][hapmap];0.93[YRI][hapmap];0.93[AFR][1000 genomes]
rs34238085	0.96[AFR][1000 genomes]
rs34523877	0.96[AFR][1000 genomes]
rs34762015	0.83[ASW][hapmap];1.00[LWK][hapmap];0.93[YRI][hapmap];0.94[AFR][1000 genomes]
rs35133416	0.92[AFR][1000 genomes]
rs35976326	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3733063	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.86[LWK][hapmap];0.85[MEX][hapmap];1.00[TSI][hapmap];0.86[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3852062	0.82[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs3886875	0.91[CEU][hapmap];0.96[TSI][hapmap];0.84[EUR][1000 genomes]
rs4082828	0.91[CEU][hapmap];0.81[LWK][hapmap];0.85[MEX][hapmap];0.96[TSI][hapmap];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs55676974	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs55806905	0.90[EUR][1000 genomes]
rs55813842	0.90[EUR][1000 genomes]
rs55847657	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55965068	0.93[AFR][1000 genomes]
rs55997317	0.95[AFR][1000 genomes]
rs56002041	0.90[EUR][1000 genomes]
rs56322342	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs56352611	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56357549	0.94[AFR][1000 genomes]
rs56899118	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs57441156	0.89[AFR][1000 genomes]
rs57849650	0.90[EUR][1000 genomes]
rs58531656	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60382084	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61150019	0.95[AFR][1000 genomes]
rs61644644	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61729402	1.00[ASN][1000 genomes]
rs61729450	1.00[ASN][1000 genomes]
rs6445385	0.91[CEU][hapmap];0.96[YRI][hapmap];0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6445386	0.83[ASW][hapmap];1.00[LWK][hapmap];0.93[YRI][hapmap];0.95[AFR][1000 genomes]
rs6763882	0.83[ASW][hapmap];0.97[LWK][hapmap];0.93[YRI][hapmap];0.91[AFR][1000 genomes]
rs6783652	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6793317	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.83[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6796333	0.83[ASW][hapmap];1.00[LWK][hapmap];0.93[YRI][hapmap];0.93[AFR][1000 genomes]
rs6809248	1.00[CHD][hapmap];0.85[YRI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs724801	0.91[CEU][hapmap]
rs729555	0.91[CEU][hapmap]
rs73072990	0.84[EUR][1000 genomes]
rs73088773	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73088783	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73088785	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73088791	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73088800	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73091166	0.90[EUR][1000 genomes]
rs73091168	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs746239	0.90[EUR][1000 genomes]
rs7615405	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7628461	0.91[CEU][hapmap];0.85[MEX][hapmap];0.96[TSI][hapmap];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7633687	0.91[CEU][hapmap];0.96[TSI][hapmap];0.90[EUR][1000 genomes]
rs7638204	0.91[CEU][hapmap];0.85[MEX][hapmap];0.96[TSI][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7643913	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519445	chr3:52004317-52367932	Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	134 gene(s)	inside rSNPs	diseases
2	nsv470572	chr3:52123313-52350212	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	103 gene(s)	inside rSNPs	diseases
3	nsv834694	chr3:52178983-52335821	Flanking Active TSS Enhancers Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	102 gene(s)	inside rSNPs	diseases
4	nsv834695	chr3:52199701-52400577	Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	98 gene(s)	inside rSNPs	diseases
5	nsv876787	chr3:52236762-52367932	Genic enhancers Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	90 gene(s)	inside rSNPs	diseases
6	nsv876788	chr3:52247110-52367932	Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	90 gene(s)	inside rSNPs	diseases
7	nsv876789	chr3:52247110-52575831	Flanking Active TSS Bivalent Enhancer Strong transcription Weak transcription Enhancers Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	117 gene(s)	inside rSNPs	diseases
8	nsv984542	chr3:52285682-52516115	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	94 gene(s)	inside rSNPs	diseases
9	nsv834696	chr3:52317478-52479537	Flanking Active TSS Active TSS Strong transcription Weak transcription Bivalent Enhancer Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	45 gene(s)	inside rSNPs	diseases

mRNA abundance (count:12)

SNP	Gene	Cis/trans	Tissue	Source
rs17052053	DNAH1	cis	parietal	SCAN
rs17052053	LOC286359	trans	parietal	SCAN
rs17052053	ZNF589	cis	cerebellum	SCAN
rs17052053	PPM1M	cis	parietal	SCAN
rs17052053	SIPA1L3	trans	brain	seeQTL
rs17052053	PPM1M	cis	Nerve Tibial	GTEx
rs17052053	TKT	cis	cerebellum	SCAN
rs17052053	PPM1M	cis	Artery Tibial	GTEx
rs17052053	IDO2	trans	brain	seeQTL
rs17052053	SEMA3G	cis	cerebellum	SCAN
rs17052053	NISCH	cis	parietal	SCAN
rs17052053	DNAH1	cis	cerebellum	SCAN

Chromatin state (count:111 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:52323200-52341000	Weak transcription	Small Intestine	intestine
2	chr3:52325600-52340400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
3	chr3:52327200-52351600	Weak transcription	Aorta	Aorta
4	chr3:52327400-52338400	Weak transcription	Rectal Smooth Muscle	rectum
5	chr3:52327400-52351600	Weak transcription	Brain Anterior Caudate	brain
6	chr3:52327600-52344600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
7	chr3:52328000-52337000	Weak transcription	Adipose Nuclei	Adipose
8	chr3:52328000-52347000	Weak transcription	Skeletal Muscle Female	skeletal muscle
9	chr3:52328200-52340200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
10	chr3:52328200-52366000	Weak transcription	Brain Angular Gyrus	brain
11	chr3:52328600-52340000	Weak transcription	Primary T helper cells PMA-I stimulated	--
12	chr3:52328800-52340200	Weak transcription	Sigmoid Colon	Sigmoid Colon
13	chr3:52328800-52367600	Weak transcription	Brain Substantia Nigra	brain
14	chr3:52329200-52351600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
15	chr3:52330000-52335000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr3:52330200-52334600	Enhancers	Primary hematopoietic stem cells	blood
17	chr3:52330200-52343400	Weak transcription	Primary neutrophils fromperipheralblood	blood
18	chr3:52330200-52343400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
19	chr3:52330200-52345400	Weak transcription	Brain Cingulate Gyrus	brain
20	chr3:52330400-52378600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
21	chr3:52331000-52337600	Weak transcription	Primary T cells from cord blood	blood
22	chr3:52331000-52343200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
23	chr3:52331200-52335200	Enhancers	Duodenum Mucosa	Duodenum
24	chr3:52331200-52342800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
25	chr3:52331400-52336400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
26	chr3:52331600-52334600	Enhancers	Fetal Thymus	thymus
27	chr3:52331600-52335200	Enhancers	Stomach Mucosa	stomach
28	chr3:52331800-52335600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
29	chr3:52332000-52335200	Bivalent Enhancer	Fetal Muscle Trunk	muscle
30	chr3:52332000-52335200	Enhancers	Placenta	Placenta
31	chr3:52332200-52335200	Enhancers	Lung	lung
32	chr3:52332400-52334600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr3:52332400-52335200	Enhancers	Right Ventricle	heart
34	chr3:52332600-52334600	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
35	chr3:52332600-52334600	Flanking Bivalent TSS/Enh	Brain Germinal Matrix	brain
36	chr3:52332600-52334600	Flanking Active TSS	HepG2	liver
37	chr3:52332600-52335200	Enhancers	Fetal Heart	heart
38	chr3:52332600-52335200	Enhancers	Left Ventricle	heart
39	chr3:52332600-52335400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr3:52332600-52335600	Bivalent Enhancer	Fetal Brain Male	brain
41	chr3:52332800-52334600	Enhancers	Spleen	Spleen
42	chr3:52332800-52335200	Enhancers	NH-A	brain
43	chr3:52332800-52335400	Enhancers	Placenta Amnion	Placenta Amnion
44	chr3:52333000-52334600	Enhancers	Pancreas	Pancrea
45	chr3:52333000-52335600	Enhancers	Fetal Muscle Leg	muscle
46	chr3:52333000-52340800	Weak transcription	Primary T helper cells fromperipheralblood	blood
47	chr3:52333000-52341200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
48	chr3:52333000-52351600	Weak transcription	Thymus	Thymus
49	chr3:52333200-52334600	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
50	chr3:52333200-52334600	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived

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