Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:53674896..53676899-chr3:53679106..53681380,2	K562	blood:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10510765	1.00[CHB][hapmap]
rs10510766	1.00[CHB][hapmap]
rs11705918	1.00[CHB][hapmap]
rs11706303	1.00[CHB][hapmap]
rs11708227	1.00[CHB][hapmap]
rs11709505	1.00[CHB][hapmap]
rs11719179	1.00[CHB][hapmap]
rs13062035	0.81[EUR][1000 genomes]
rs13076366	1.00[CHB][hapmap]
rs13082692	1.00[CHB][hapmap]
rs13086947	0.91[EUR][1000 genomes]
rs17053338	0.82[CEU][hapmap];1.00[CHB][hapmap];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2612020	0.98[EUR][1000 genomes]
rs2680657	1.00[CEU][hapmap];0.98[EUR][1000 genomes]
rs2680659	1.00[CEU][hapmap];0.98[EUR][1000 genomes]
rs36006337	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3774522	0.81[EUR][1000 genomes]
rs4687586	1.00[CHB][hapmap]
rs62621128	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6445606	1.00[CHB][hapmap]
rs71301841	0.83[EUR][1000 genomes]
rs71301847	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73840150	0.85[EUR][1000 genomes]
rs893363	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1003621	chr3:53448934-54425322	Active TSS Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv1001128	chr3:53659570-53927842	Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
3	esv3449699	chr3:53673112-53677010	Weak transcription Strong transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:53652800-53684000	Weak transcription	Right Atrium	heart
2	chr3:53666400-53681400	Weak transcription	Fetal Lung	lung
3	chr3:53667600-53680600	Weak transcription	Fetal Intestine Large	intestine
4	chr3:53674800-53678000	Strong transcription	Fetal Intestine Small	intestine
5	chr3:53675200-53677600	Weak transcription	Esophagus	oesophagus
6	chr3:53676000-53677200	Enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr3:53676200-53678000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
8	chr3:53676400-53676800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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