Variant report

Variant	rs1310173
Chromosome Location	chr8:64624174-64624175
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs1217096	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1217098	0.83[EUR][1000 genomes]
rs1217099	0.83[EUR][1000 genomes]
rs1217104	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs16930633	0.82[EUR][1000 genomes]
rs16930637	0.82[EUR][1000 genomes]
rs57093124	0.84[EUR][1000 genomes]
rs58926565	0.85[EUR][1000 genomes]
rs66513944	0.83[EUR][1000 genomes]
rs790565	0.83[EUR][1000 genomes]
rs790566	0.82[EUR][1000 genomes]
rs790567	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs806255	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831343	chr8:64436268-64642328	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64617000-64628000	Weak transcription	Colon Smooth Muscle	Colon
2	chr8:64621400-64627000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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