Variant report
Variant | rs790567 |
---|---|
Chromosome Location | chr8:64621434-64621435 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10957297 | 0.86[CEU][hapmap] |
rs1149470 | 0.85[EUR][1000 genomes] |
rs1149471 | 0.83[EUR][1000 genomes] |
rs1149472 | 0.84[EUR][1000 genomes] |
rs1149473 | 0.82[EUR][1000 genomes] |
rs1149474 | 0.83[EUR][1000 genomes] |
rs1149475 | 0.83[EUR][1000 genomes] |
rs1217096 | 0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1217097 | 0.84[EUR][1000 genomes] |
rs1217098 | 0.88[EUR][1000 genomes] |
rs1217099 | 0.88[EUR][1000 genomes] |
rs1217101 | 0.83[EUR][1000 genomes] |
rs1217103 | 0.85[EUR][1000 genomes] |
rs1217104 | 0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs1217105 | 0.84[EUR][1000 genomes] |
rs1217107 | 0.83[EUR][1000 genomes] |
rs1217108 | 0.83[EUR][1000 genomes] |
rs1217109 | 0.83[EUR][1000 genomes] |
rs1217110 | 0.81[EUR][1000 genomes] |
rs1238050 | 0.80[EUR][1000 genomes] |
rs1310173 | 0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs16930633 | 0.91[EUR][1000 genomes] |
rs16930637 | 0.90[EUR][1000 genomes] |
rs17215671 | 0.85[EUR][1000 genomes] |
rs28439112 | 0.80[EUR][1000 genomes] |
rs28542151 | 0.81[EUR][1000 genomes] |
rs28549862 | 0.81[EUR][1000 genomes] |
rs28721440 | 0.81[EUR][1000 genomes] |
rs57093124 | 0.92[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs58926565 | 0.94[EUR][1000 genomes] |
rs66503419 | 0.86[EUR][1000 genomes] |
rs66513944 | 0.90[EUR][1000 genomes] |
rs67344323 | 0.83[EUR][1000 genomes] |
rs67801322 | 0.85[EUR][1000 genomes] |
rs6992714 | 0.86[EUR][1000 genomes] |
rs72649240 | 0.85[EUR][1000 genomes] |
rs7813066 | 0.88[EUR][1000 genomes] |
rs7824991 | 0.95[CEU][hapmap] |
rs790561 | 0.85[EUR][1000 genomes] |
rs790563 | 0.83[EUR][1000 genomes] |
rs790565 | 0.88[EUR][1000 genomes] |
rs790566 | 0.88[EUR][1000 genomes] |
rs806255 | 0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs9694306 | 0.84[EUR][1000 genomes] |
rs978336 | 0.83[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv831343 | chr8:64436268-64642328 | Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:64617000-64628000 | Weak transcription | Colon Smooth Muscle | Colon |
2 | chr8:64621400-64623400 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
3 | chr8:64621400-64627000 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |