Variant report

Variant	rs1217108
Chromosome Location	chr8:64579235-64579236
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs1149456	0.92[EUR][1000 genomes]
rs1149457	0.92[EUR][1000 genomes]
rs1149470	0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1149471	0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1149472	0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1149473	0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1149474	0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1149475	0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1217096	0.84[EUR][1000 genomes]
rs1217098	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1217099	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1217101	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1217103	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1217106	0.88[EUR][1000 genomes]
rs1217107	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1217109	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1217110	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1238050	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16930633	0.81[EUR][1000 genomes]
rs17215671	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs28439112	0.81[EUR][1000 genomes]
rs28542151	0.81[EUR][1000 genomes]
rs28549862	0.81[EUR][1000 genomes]
rs28721440	0.81[EUR][1000 genomes]
rs57093124	0.81[EUR][1000 genomes]
rs66503419	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs67344323	0.83[EUR][1000 genomes]
rs67801322	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6992714	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72649240	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs751769	0.93[EUR][1000 genomes]
rs7834364	0.80[EUR][1000 genomes]
rs790563	0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs790564	0.86[EUR][1000 genomes]
rs790565	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs790566	0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs790567	0.83[EUR][1000 genomes]
rs790571	0.93[EUR][1000 genomes]
rs806255	0.83[EUR][1000 genomes]
rs966294	0.90[EUR][1000 genomes]
rs978336	0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831343	chr8:64436268-64642328	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64578600-64582200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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