Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:64539103..64540764-chr8:65177326..65179205,2	MCF-7	breast:
2	chr8:64540100..64540605-chr8:65176512..65177253,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10957297	0.86[CEU][hapmap]
rs1149456	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1149457	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1149470	0.89[EUR][1000 genomes]
rs1149471	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1149472	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1149473	0.88[EUR][1000 genomes]
rs1149474	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1149475	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1217098	0.85[EUR][1000 genomes]
rs1217099	0.85[EUR][1000 genomes]
rs1217101	0.80[EUR][1000 genomes]
rs1217106	0.86[EUR][1000 genomes]
rs1217107	0.90[EUR][1000 genomes]
rs1217108	0.90[EUR][1000 genomes]
rs1217109	0.90[EUR][1000 genomes]
rs1217110	0.92[EUR][1000 genomes]
rs1238050	0.90[EUR][1000 genomes]
rs6472116	1.00[CHB][hapmap]
rs66503419	0.81[EUR][1000 genomes]
rs6992714	0.81[EUR][1000 genomes]
rs7460297	0.86[ASN][1000 genomes]
rs751769	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7824991	0.95[CEU][hapmap]
rs790563	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs790565	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs790566	0.84[EUR][1000 genomes]
rs790571	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs978336	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831343	chr8:64436268-64642328	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64540400-64540800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr8:64540400-64540800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr8:64540400-64540800	ZNF genes & repeats	Pancreas	Pancrea
4	chr8:64540400-64545200	Weak transcription	Brain Germinal Matrix	brain

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