Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10091567	0.84[EUR][1000 genomes]
rs10109147	0.84[EUR][1000 genomes]
rs10957296	0.84[EUR][1000 genomes]
rs1217096	0.84[EUR][1000 genomes]
rs1217097	0.95[EUR][1000 genomes]
rs1217104	0.85[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs1217105	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1402380	0.87[EUR][1000 genomes]
rs1520919	0.87[EUR][1000 genomes]
rs1590109	0.84[EUR][1000 genomes]
rs16930633	0.81[EUR][1000 genomes]
rs16930637	0.81[EUR][1000 genomes]
rs1996708	0.83[EUR][1000 genomes]
rs2204012	0.84[EUR][1000 genomes]
rs57093124	0.82[EUR][1000 genomes]
rs58926565	0.84[EUR][1000 genomes]
rs6472119	0.81[EUR][1000 genomes]
rs6472121	0.87[EUR][1000 genomes]
rs6472123	0.87[EUR][1000 genomes]
rs66513944	0.82[EUR][1000 genomes]
rs7834671	0.87[EUR][1000 genomes]
rs790561	0.96[EUR][1000 genomes]
rs790564	0.82[EUR][1000 genomes]
rs790567	0.84[EUR][1000 genomes]
rs806255	0.82[EUR][1000 genomes]
rs812603	0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831343	chr8:64436268-64642328	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64617000-64628000	Weak transcription	Colon Smooth Muscle	Colon
2	chr8:64627000-64628400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr8:64627200-64627600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

Quick Search: