Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10091265	0.85[ASN][1000 genomes]
rs10091567	0.82[EUR][1000 genomes]
rs10109147	0.81[EUR][1000 genomes]
rs10957292	0.84[ASN][1000 genomes]
rs10957296	0.80[EUR][1000 genomes]
rs10957297	0.95[CEU][hapmap]
rs11779429	0.86[ASN][1000 genomes]
rs1217096	0.85[EUR][1000 genomes]
rs1217105	0.95[EUR][1000 genomes]
rs1402380	0.84[EUR][1000 genomes]
rs1520919	0.84[EUR][1000 genomes]
rs1590109	0.81[EUR][1000 genomes]
rs16930598	0.84[ASN][1000 genomes]
rs2060859	0.86[ASN][1000 genomes]
rs2204012	0.81[EUR][1000 genomes]
rs3862073	0.84[ASN][1000 genomes]
rs58926565	0.81[EUR][1000 genomes]
rs6472121	0.84[EUR][1000 genomes]
rs6472123	0.84[EUR][1000 genomes]
rs7824991	0.95[CEU][hapmap]
rs7834671	0.84[EUR][1000 genomes]
rs790561	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs790564	0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs790567	0.84[EUR][1000 genomes]
rs806255	0.84[EUR][1000 genomes]
rs812603	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9694306	0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831343	chr8:64436268-64642328	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64617000-64628000	Weak transcription	Colon Smooth Muscle	Colon
2	chr8:64621400-64623400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr8:64621400-64627000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr8:64622000-64623400	Enhancers	Fetal Heart	heart

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