The 2.0 version of rSNPBase

Variant report

Variant rs13108043
Chromosome Location chr4:88044336-88044337
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:88019000-88072200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr4:88026400-88063600 Strong transcription Primary hematopoietic stem cells short term culture blood
3 chr4:88026600-88055600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr4:88030000-88048800 Weak transcription A549 lung
5 chr4:88030600-88057600 Weak transcription Brain Germinal Matrix brain
6 chr4:88032800-88059000 Strong transcription Primary T regulatory cells fromperipheralblood blood
7 chr4:88033600-88047600 Weak transcription HSMM muscle
8 chr4:88035600-88056800 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr4:88035600-88063800 Strong transcription Primary T cells from cord blood blood
10 chr4:88036400-88063600 Weak transcription Fetal Brain Male brain
11 chr4:88036800-88046600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr4:88036800-88046800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr4:88036800-88059200 Weak transcription Fetal Brain Female brain
14 chr4:88038000-88046200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr4:88038000-88046200 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr4:88038400-88046600 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr4:88038600-88045800 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr4:88038800-88046000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr4:88038800-88046800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr4:88038800-88047000 Weak transcription Placenta Amnion Placenta Amnion
21 chr4:88039600-88045800 Weak transcription K562 blood
22 chr4:88039600-88046800 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr4:88040000-88047200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr4:88040000-88052000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr4:88040600-88045800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr4:88040800-88045600 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr4:88040800-88046200 Weak transcription H1 Cell Line embryonic stem cell
28 chr4:88041200-88048800 Weak transcription ES-I3 Cell Line embryonic stem cell
29 chr4:88041600-88045000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr4:88041800-88045600 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr4:88041800-88045800 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr4:88041800-88046600 Weak transcription Thymus Thymus
33 chr4:88042000-88044400 Enhancers Liver Liver
34 chr4:88042000-88045600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr4:88042000-88046200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr4:88042000-88046200 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr4:88042200-88045400 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr4:88042200-88046000 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr4:88042200-88046600 Weak transcription Fetal Muscle Trunk muscle
40 chr4:88042200-88046800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr4:88042400-88044600 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr4:88042400-88046000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr4:88042400-88049000 Strong transcription HepG2 liver
44 chr4:88042600-88044600 Weak transcription Primary monocytes fromperipheralblood blood
45 chr4:88042600-88045800 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr4:88042600-88046000 Weak transcription H9 Cell Line embryonic stem cell
47 chr4:88042600-88046000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr4:88042600-88046800 Weak transcription Pancreas Pancrea
49 chr4:88042800-88044600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr4:88042800-88044800 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015