Variant report

Variant	rs13138213
Chromosome Location	chr4:30815089-30815090
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11946238	0.83[CEU][hapmap];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12513276	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1348923	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1374650	0.83[CEU][hapmap];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1374654	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1550896	0.95[JPT][hapmap];0.91[ASN][1000 genomes]
rs2121656	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6820160	0.83[CHB][hapmap];0.90[JPT][hapmap];0.90[ASN][1000 genomes]
rs6820710	0.83[CHB][hapmap];0.95[JPT][hapmap];0.89[ASN][1000 genomes]
rs6844742	0.82[CEU][hapmap];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7700046	0.88[CHB][hapmap];0.95[JPT][hapmap];0.91[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30795800-30824000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr4:30803800-30817200	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr4:30804800-30819400	Weak transcription	Aorta	Aorta
4	chr4:30811400-30819000	Weak transcription	Fetal Heart	heart
5	chr4:30811600-30817200	Weak transcription	Fetal Lung	lung
6	chr4:30813800-30835800	Weak transcription	Colon Smooth Muscle	Colon

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links