Variant report

Variant	rs1550896
Chromosome Location	chr4:30785094-30785095
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10517216	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11721555	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11723028	0.85[EUR][1000 genomes]
rs13135261	0.91[CEU][hapmap];0.84[YRI][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs13138213	0.95[JPT][hapmap];0.91[ASN][1000 genomes]
rs13143986	0.87[ASN][1000 genomes]
rs1348923	0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs1374651	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1374652	0.86[CEU][hapmap];0.88[YRI][hapmap];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2121659	0.91[CEU][hapmap];0.88[YRI][hapmap];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs34343083	0.81[EUR][1000 genomes]
rs3756024	0.85[CHB][hapmap]
rs6810526	0.82[CEU][hapmap];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6811850	0.83[CEU][hapmap];0.89[YRI][hapmap];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6819990	0.91[CEU][hapmap];0.84[YRI][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6820160	1.00[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.96[YRI][hapmap];0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6820710	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6845219	0.82[EUR][1000 genomes]
rs7687637	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7700046	0.96[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30771200-30789400	Weak transcription	Fetal Muscle Trunk	muscle
2	chr4:30779200-30787800	Weak transcription	Rectal Smooth Muscle	rectum
3	chr4:30779200-30790600	Weak transcription	Fetal Lung	lung
4	chr4:30781600-30785200	Weak transcription	Colon Smooth Muscle	Colon
5	chr4:30784600-30790600	Weak transcription	Aorta	Aorta
6	chr4:30784800-30785600	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chr4:30785000-30785600	Enhancers	HUES64 Cell Line	embryonic stem cell

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