Variant report

Variant	rs11723028
Chromosome Location	chr4:30783301-30783302
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10517216	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11721555	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11941127	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11946238	0.90[ASN][1000 genomes]
rs13135261	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1374650	0.90[ASN][1000 genomes]
rs1374651	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1374652	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1374654	0.96[ASN][1000 genomes]
rs1550896	0.85[EUR][1000 genomes]
rs16884042	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16884047	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2029202	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2121656	0.92[ASN][1000 genomes]
rs2121659	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2166718	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34343083	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6810526	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6811850	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6819990	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6820160	0.85[EUR][1000 genomes]
rs6820710	0.85[EUR][1000 genomes]
rs6844742	0.90[ASN][1000 genomes]
rs6845219	0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7664916	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7687637	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7700046	0.82[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30771200-30789400	Weak transcription	Fetal Muscle Trunk	muscle
2	chr4:30779000-30785000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr4:30779200-30785000	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr4:30779200-30787800	Weak transcription	Rectal Smooth Muscle	rectum
5	chr4:30779200-30790600	Weak transcription	Fetal Lung	lung
6	chr4:30781600-30785200	Weak transcription	Colon Smooth Muscle	Colon
7	chr4:30782800-30784400	Weak transcription	Aorta	Aorta

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links