Variant report

Variant	rs16884042
Chromosome Location	chr4:30752295-30752296
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10005883	0.81[YRI][hapmap]
rs10517216	0.91[CEU][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11721555	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11723028	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11941127	0.99[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11946238	0.83[JPT][hapmap];0.81[ASN][1000 genomes]
rs12509289	0.82[JPT][hapmap]
rs13135261	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13143986	0.83[EUR][1000 genomes]
rs1374650	0.83[JPT][hapmap];0.81[ASN][1000 genomes]
rs1374651	0.89[JPT][hapmap];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1374652	1.00[JPT][hapmap];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1374654	0.86[ASN][1000 genomes]
rs1486767	0.83[YRI][hapmap]
rs16884047	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1823197	0.91[JPT][hapmap]
rs2029202	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2121656	0.84[JPT][hapmap];0.83[ASN][1000 genomes]
rs2121659	0.82[CEU][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2166718	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34343083	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6810526	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6811850	1.00[JPT][hapmap];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6819990	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6842641	0.90[JPT][hapmap]
rs6844742	0.81[ASN][1000 genomes]
rs6845219	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7664916	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7687637	0.87[EUR][1000 genomes]
rs958274	0.91[JPT][hapmap]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30726200-30757400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr4:30730200-30754800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr4:30737400-30770800	Weak transcription	Fetal Muscle Trunk	muscle
4	chr4:30739400-30765000	Weak transcription	Fetal Lung	lung
5	chr4:30746400-30761800	Weak transcription	Left Ventricle	heart
6	chr4:30746400-30767000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr4:30746600-30754800	Weak transcription	Rectal Smooth Muscle	rectum
8	chr4:30746800-30754600	Weak transcription	Colon Smooth Muscle	Colon
9	chr4:30747400-30753600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr4:30747400-30755000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr4:30748200-30754800	Weak transcription	NHLF	lung
12	chr4:30748400-30754600	Weak transcription	Stomach Smooth Muscle	stomach
13	chr4:30748800-30761000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
14	chr4:30750000-30754400	Weak transcription	Fetal Heart	heart
15	chr4:30750400-30754800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr4:30752000-30752400	Enhancers	Aorta	Aorta

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