Variant report

Variant	rs7687637
Chromosome Location	chr4:30792302-30792303
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:30785664..30787965-chr4:30791113..30792879,2	MCF-7	breast:

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10517216	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11721555	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11723028	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11941127	0.85[EUR][1000 genomes]
rs11946238	0.84[ASN][1000 genomes]
rs13135261	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1374650	0.84[ASN][1000 genomes]
rs1374651	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1374652	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1374654	0.89[ASN][1000 genomes]
rs1550896	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs16884042	0.87[EUR][1000 genomes]
rs16884047	0.87[EUR][1000 genomes]
rs2029202	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2121656	0.85[ASN][1000 genomes]
rs2121659	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2166718	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs34343083	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6810526	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6811850	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6819990	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6820160	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6820710	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6844742	0.84[ASN][1000 genomes]
rs6845219	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7664916	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7700046	0.89[EUR][1000 genomes]

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30791000-30794200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr4:30791000-30794200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr4:30791200-30792600	Weak transcription	Fetal Heart	heart
4	chr4:30791200-30794200	Weak transcription	Stomach Smooth Muscle	stomach
5	chr4:30791200-30794800	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr4:30791200-30804400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr4:30791400-30792800	Enhancers	Fetal Intestine Small	intestine
8	chr4:30791400-30794000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
9	chr4:30791400-30794200	Weak transcription	Cortex derived primary cultured neurospheres	brain
10	chr4:30791400-30794200	Weak transcription	Brain Anterior Caudate	brain
11	chr4:30791400-30794800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
12	chr4:30791400-30795400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr4:30791400-30802400	Weak transcription	Aorta	Aorta
14	chr4:30791400-30802600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr4:30791600-30792600	Weak transcription	Duodenum Mucosa	Duodenum
16	chr4:30791600-30794000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr4:30791600-30794200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
18	chr4:30791600-30794400	Weak transcription	HUES64 Cell Line	embryonic stem cell
19	chr4:30791600-30794600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr4:30791600-30795200	Weak transcription	HUES6 Cell Line	embryonic stem cell
21	chr4:30791600-30795200	Weak transcription	Placenta Amnion	Placenta Amnion
22	chr4:30791600-30809800	Weak transcription	Fetal Lung	lung
23	chr4:30792000-30795200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr4:30792200-30793800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
25	chr4:30792200-30794400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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