Variant report

Variant	rs13156960
Chromosome Location	chr5:94085688-94085689
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:94078591..94081129-chr5:94083066..94085873,2	MCF-7	breast:

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs1006627	0.80[ASN][1000 genomes]
rs1026232	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11135410	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11955417	0.85[ASN][1000 genomes]
rs11955446	0.85[ASN][1000 genomes]
rs12514098	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12519472	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12655669	0.80[ASN][1000 genomes]
rs12659125	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1562911	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17083896	0.80[ASN][1000 genomes]
rs17083911	0.80[ASN][1000 genomes]
rs17083945	0.81[ASN][1000 genomes]
rs2346764	0.80[ASN][1000 genomes]
rs34074526	0.81[ASN][1000 genomes]
rs57041121	0.80[ASN][1000 genomes]
rs61238929	0.84[ASN][1000 genomes]
rs66901899	0.83[ASN][1000 genomes]
rs67674687	0.85[ASN][1000 genomes]
rs6869588	0.85[ASN][1000 genomes]
rs72773573	0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs72773575	0.88[ASN][1000 genomes]
rs72773586	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72773592	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs72775304	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7735473	0.83[ASN][1000 genomes]
rs7737187	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7737366	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs880264	0.80[ASN][1000 genomes]
rs9918142	0.87[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94072600-94086200	Weak transcription	Spleen	Spleen
2	chr5:94074200-94127600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr5:94082400-94086200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr5:94082800-94086400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr5:94083000-94088000	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr5:94083000-94108000	Weak transcription	Primary monocytes fromperipheralblood	blood
7	chr5:94083000-94125800	Weak transcription	HUVEC	blood vessel
8	chr5:94084800-94085800	Weak transcription	Primary hematopoietic stem cells	blood
9	chr5:94084800-94088600	Weak transcription	Primary neutrophils fromperipheralblood	blood
10	chr5:94085000-94090400	Weak transcription	Hela-S3	cervix
11	chr5:94085200-94105800	Weak transcription	Fetal Thymus	thymus
12	chr5:94085400-94087600	Enhancers	Fetal Heart	heart

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