Variant report
Variant | rs880264 |
---|---|
Chromosome Location | chr5:94069803-94069804 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:2 , 50 per page) page:
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No data |
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rs_ID | r2[population] |
---|---|
rs1006626 | 0.87[ASN][1000 genomes] |
rs1006627 | 0.81[ASN][1000 genomes] |
rs1026232 | 0.90[ASN][1000 genomes] |
rs11135407 | 0.84[ASN][1000 genomes] |
rs11135408 | 0.83[ASN][1000 genomes] |
rs11135410 | 0.83[ASN][1000 genomes] |
rs11135411 | 0.92[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs1124668 | 0.86[ASN][1000 genomes] |
rs11955417 | 0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs11955446 | 0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12514098 | 0.86[ASN][1000 genomes] |
rs12515845 | 0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs12519472 | 0.88[ASN][1000 genomes] |
rs12523457 | 0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs12651956 | 0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs12652705 | 0.82[ASN][1000 genomes] |
rs12653116 | 0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs12654602 | 0.84[ASN][1000 genomes] |
rs12655521 | 0.85[ASN][1000 genomes] |
rs12655665 | 0.85[ASN][1000 genomes] |
rs12655669 | 0.81[ASN][1000 genomes] |
rs12656300 | 0.82[ASN][1000 genomes] |
rs12656694 | 0.84[ASN][1000 genomes] |
rs12657227 | 0.85[ASN][1000 genomes] |
rs12657323 | 0.84[ASN][1000 genomes] |
rs12659125 | 0.88[ASN][1000 genomes] |
rs12659597 | 0.85[ASN][1000 genomes] |
rs13156960 | 0.80[ASN][1000 genomes] |
rs1390642 | 0.84[ASN][1000 genomes] |
rs1390644 | 0.87[ASN][1000 genomes] |
rs1451735 | 0.85[ASN][1000 genomes] |
rs1562911 | 0.88[ASN][1000 genomes] |
rs17083827 | 0.84[ASN][1000 genomes] |
rs17083828 | 0.84[ASN][1000 genomes] |
rs17083873 | 0.80[ASN][1000 genomes] |
rs17083887 | 0.86[ASN][1000 genomes] |
rs17083888 | 0.85[ASN][1000 genomes] |
rs17083896 | 0.81[ASN][1000 genomes] |
rs17083911 | 0.81[ASN][1000 genomes] |
rs17083945 | 0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs2003118 | 0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs2032813 | 0.87[ASN][1000 genomes] |
rs2044910 | 0.80[ASN][1000 genomes] |
rs2044911 | 0.85[ASN][1000 genomes] |
rs2047318 | 0.84[ASN][1000 genomes] |
rs2122984 | 0.84[ASN][1000 genomes] |
rs2122985 | 0.84[ASN][1000 genomes] |
rs2132548 | 0.85[ASN][1000 genomes] |
rs2201620 | 0.85[ASN][1000 genomes] |
rs2220965 | 0.85[ASN][1000 genomes] |
rs2270626 | 0.86[ASN][1000 genomes] |
rs2346764 | 0.81[ASN][1000 genomes] |
rs306574 | 0.87[ASN][1000 genomes] |
rs34074526 | 0.82[ASN][1000 genomes] |
rs35111621 | 0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs56242961 | 0.84[ASN][1000 genomes] |
rs56824518 | 0.85[ASN][1000 genomes] |
rs57041121 | 0.81[ASN][1000 genomes] |
rs57188935 | 0.84[ASN][1000 genomes] |
rs60191000 | 0.85[ASN][1000 genomes] |
rs61152231 | 0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs61238929 | 0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs6556850 | 0.85[ASN][1000 genomes] |
rs6556851 | 0.85[ASN][1000 genomes] |
rs66464936 | 0.85[ASN][1000 genomes] |
rs66483218 | 0.85[ASN][1000 genomes] |
rs66488253 | 0.84[ASN][1000 genomes] |
rs66518525 | 0.85[ASN][1000 genomes] |
rs66578784 | 0.86[ASN][1000 genomes] |
rs66666052 | 0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs66694903 | 0.84[ASN][1000 genomes] |
rs66696350 | 0.85[ASN][1000 genomes] |
rs66901899 | 0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs66936860 | 0.83[ASN][1000 genomes] |
rs67313609 | 0.87[ASN][1000 genomes] |
rs67531524 | 0.84[ASN][1000 genomes] |
rs67573880 | 0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs67577452 | 0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs67674687 | 0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs67831380 | 0.87[ASN][1000 genomes] |
rs67994891 | 0.82[ASN][1000 genomes] |
rs6869588 | 0.84[ASN][1000 genomes] |
rs6879384 | 0.85[ASN][1000 genomes] |
rs6883128 | 0.85[ASN][1000 genomes] |
rs6883326 | 0.85[ASN][1000 genomes] |
rs6890092 | 0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs6891545 | 0.84[ASN][1000 genomes] |
rs6893587 | 0.81[ASN][1000 genomes] |
rs6897550 | 0.83[ASN][1000 genomes] |
rs72773517 | 0.84[ASN][1000 genomes] |
rs72773526 | 0.84[ASN][1000 genomes] |
rs72773528 | 0.80[ASN][1000 genomes] |
rs72773533 | 0.85[ASN][1000 genomes] |
rs72773547 | 0.87[ASN][1000 genomes] |
rs72773549 | 0.88[ASN][1000 genomes] |
rs72773573 | 0.88[ASN][1000 genomes] |
rs72773575 | 0.87[ASN][1000 genomes] |
rs72773586 | 0.86[ASN][1000 genomes] |
rs72773592 | 0.83[ASN][1000 genomes] |
rs72773593 | 0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs72775304 | 0.85[ASN][1000 genomes] |
rs73136312 | 0.84[ASN][1000 genomes] |
rs7446179 | 0.84[ASN][1000 genomes] |
rs755900 | 0.82[ASN][1000 genomes] |
rs7735473 | 0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs7735659 | 0.85[ASN][1000 genomes] |
rs7737187 | 0.88[ASN][1000 genomes] |
rs7737366 | 0.88[ASN][1000 genomes] |
rs9791082 | 0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs9918142 | 0.85[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv882387 | chr5:94001476-94071404 | Strong transcription Transcr. at gene 5' and 3' Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:94048600-94071600 | Weak transcription | Lung | lung |
2 | chr5:94048600-94081400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
3 | chr5:94049400-94081400 | Weak transcription | HUVEC | blood vessel |
4 | chr5:94049800-94077600 | Weak transcription | Primary hematopoietic stem cells | blood |
5 | chr5:94052400-94079600 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
6 | chr5:94067000-94070600 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
7 | chr5:94067000-94080600 | Weak transcription | Primary monocytes fromperipheralblood | blood |
8 | chr5:94069200-94072400 | Weak transcription | Hela-S3 | cervix |
9 | chr5:94069200-94073600 | Weak transcription | Fetal Thymus | thymus |