The 2.0 version of rSNPBase

Variant report

Variant rs66483218
Chromosome Location chr5:93988485-93988486
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:93955000-93995400 Weak transcription Gastric stomach
2 chr5:93955600-93990800 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr5:93955800-93995400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr5:93955800-94027600 Weak transcription NH-A brain
5 chr5:93956200-93993200 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr5:93963800-93995800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr5:93964600-93995200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr5:93966600-93990800 Weak transcription Brain Hippocampus Middle brain
9 chr5:93967400-93991400 Weak transcription Brain Inferior Temporal Lobe brain
10 chr5:93967800-93991000 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr5:93968000-93990200 Weak transcription Fetal Kidney kidney
12 chr5:93968000-93995200 Weak transcription HSMM muscle
13 chr5:93969400-94008400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr5:93971400-93995400 Weak transcription Spleen Spleen
15 chr5:93973400-93989800 Weak transcription Brain Angular Gyrus brain
16 chr5:93973800-93995200 Weak transcription Lung lung
17 chr5:93973800-94004200 Weak transcription Stomach Smooth Muscle stomach
18 chr5:93974200-93995400 Weak transcription Ovary ovary
19 chr5:93974400-93995200 Weak transcription Thymus Thymus
20 chr5:93974600-93993400 Strong transcription Hela-S3 cervix
21 chr5:93975600-93990600 Weak transcription Fetal Heart heart
22 chr5:93975600-93990800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr5:93975600-93995200 Weak transcription Esophagus oesophagus
24 chr5:93975600-93995200 Weak transcription Fetal Stomach stomach
25 chr5:93975600-94012000 Weak transcription Aorta Aorta
26 chr5:93975800-93989600 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr5:93975800-93991000 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr5:93975800-93993400 Weak transcription Muscle Satellite Cultured Cells --
29 chr5:93975800-93994000 Weak transcription Small Intestine intestine
30 chr5:93976000-93989400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr5:93976600-93990200 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr5:93976600-93990200 Weak transcription Liver Liver
33 chr5:93976600-93990600 Weak transcription H1 Cell Line embryonic stem cell
34 chr5:93976600-93990600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr5:93976800-93990400 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr5:93976800-93990800 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr5:93976800-94025000 Weak transcription Rectal Smooth Muscle rectum
38 chr5:93977000-93990800 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr5:93977000-93993600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr5:93977200-93990600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr5:93977400-93989200 Weak transcription Fetal Brain Female brain
42 chr5:93977400-93993600 Weak transcription K562 blood
43 chr5:93977600-93990800 Weak transcription Fetal Muscle Trunk muscle
44 chr5:93977800-93990200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr5:93977800-93995400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr5:93978000-93989000 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr5:93978000-93989200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr5:93978000-93989200 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr5:93978000-93990000 Weak transcription Fetal Intestine Large intestine
50 chr5:93978000-93990600 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015