Variant report

Variant rs6556851
Chromosome Location chr5:93993844-93993845
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:93955000-93995400 Weak transcription Gastric stomach
2 chr5:93955800-93995400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr5:93955800-94027600 Weak transcription NH-A brain
4 chr5:93963800-93995800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr5:93964600-93995200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr5:93968000-93995200 Weak transcription HSMM muscle
7 chr5:93969400-94008400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr5:93971400-93995400 Weak transcription Spleen Spleen
9 chr5:93973800-93995200 Weak transcription Lung lung
10 chr5:93973800-94004200 Weak transcription Stomach Smooth Muscle stomach
11 chr5:93974200-93995400 Weak transcription Ovary ovary
12 chr5:93974400-93995200 Weak transcription Thymus Thymus
13 chr5:93975600-93995200 Weak transcription Esophagus oesophagus
14 chr5:93975600-93995200 Weak transcription Fetal Stomach stomach
15 chr5:93975600-94012000 Weak transcription Aorta Aorta
16 chr5:93975800-93994000 Weak transcription Small Intestine intestine
17 chr5:93976800-94025000 Weak transcription Rectal Smooth Muscle rectum
18 chr5:93977800-93995400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr5:93978000-93995000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr5:93981000-94012000 Weak transcription Left Ventricle heart
21 chr5:93982600-93995400 Weak transcription Pancreas Pancrea
22 chr5:93987600-93995400 Strong transcription Fetal Thymus thymus
23 chr5:93988400-93996200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr5:93988600-93997800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr5:93988800-93995800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr5:93989000-93995600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr5:93989800-93994200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
28 chr5:93989800-93995200 Weak transcription Fetal Intestine Small intestine
29 chr5:93990200-93994400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr5:93990200-93995800 ZNF genes & repeats A549 lung
31 chr5:93990400-93994600 ZNF genes & repeats Dnd41 blood
32 chr5:93990600-93995600 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
33 chr5:93990600-93995800 ZNF genes & repeats Primary hematopoietic stem cells blood
34 chr5:93990600-93996200 ZNF genes & repeats Primary B cells from cord blood blood
35 chr5:93990600-94008200 Weak transcription Colon Smooth Muscle Colon
36 chr5:93990800-93994600 Strong transcription Primary monocytes fromperipheralblood blood
37 chr5:93990800-93994800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
38 chr5:93991200-93995400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr5:93991200-93995400 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr5:93991200-94049000 Weak transcription H1 Cell Line embryonic stem cell
41 chr5:93991800-93994000 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr5:93991800-93995000 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr5:93992600-93995400 Weak transcription Placenta Placenta
44 chr5:93992800-93995000 ZNF genes & repeats Primary T cells fromperipheralblood blood
45 chr5:93992800-93998000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr5:93993000-93994000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
47 chr5:93993000-93994400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
48 chr5:93993000-93994400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
49 chr5:93993000-93994600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
50 chr5:93993000-93995400 ZNF genes & repeats Primary B cells from peripheral blood blood

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