The 2.0 version of rSNPBase

Variant report

Variant rs12521289
Chromosome Location chr5:93997344-93997345
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:93955800-94027600 Weak transcription NH-A brain
2 chr5:93969400-94008400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr5:93973800-94004200 Weak transcription Stomach Smooth Muscle stomach
4 chr5:93975600-94012000 Weak transcription Aorta Aorta
5 chr5:93976800-94025000 Weak transcription Rectal Smooth Muscle rectum
6 chr5:93981000-94012000 Weak transcription Left Ventricle heart
7 chr5:93988600-93997800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr5:93990600-94008200 Weak transcription Colon Smooth Muscle Colon
9 chr5:93991200-94049000 Weak transcription H1 Cell Line embryonic stem cell
10 chr5:93992800-93998000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr5:93994000-93999000 Weak transcription Osteobl bone
12 chr5:93994200-93999600 Weak transcription Adipose Nuclei Adipose
13 chr5:93994200-93999800 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr5:93994200-94010200 Weak transcription NHEK skin
15 chr5:93994200-94012000 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr5:93994200-94030800 Weak transcription Right Ventricle heart
17 chr5:93994200-94047200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr5:93994400-93997600 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr5:93994400-93998600 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr5:93994400-94000200 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr5:93994400-94000400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr5:93994400-94006200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr5:93994400-94012000 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr5:93994400-94022600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr5:93994400-94025400 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr5:93994400-94027600 Weak transcription Liver Liver
27 chr5:93994400-94027600 Weak transcription NHDF-Ad bronchial
28 chr5:93994400-94029000 Weak transcription Brain Hippocampus Middle brain
29 chr5:93994400-94048800 Weak transcription Small Intestine intestine
30 chr5:93994600-93997800 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr5:93994600-93999800 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr5:93994600-94000200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr5:93994600-94007400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr5:93994600-94026600 Weak transcription Fetal Kidney kidney
35 chr5:93994600-94029200 Weak transcription Brain Anterior Caudate brain
36 chr5:93994600-94032200 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr5:93995200-93999800 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr5:93995400-93997400 Strong transcription Primary B cells from peripheral blood blood
39 chr5:93995400-94012000 Weak transcription HepG2 liver
40 chr5:93995400-94024800 Weak transcription Primary T killer memory cells from peripheral blood blood
41 chr5:93995600-93997600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr5:93995600-93998800 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr5:93995600-93999600 Weak transcription Fetal Lung lung
44 chr5:93995600-94000000 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr5:93995600-94009600 Weak transcription Fetal Brain Female brain
46 chr5:93995600-94024400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr5:93995600-94033000 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr5:93995600-94050400 Weak transcription Esophagus oesophagus
49 chr5:93995800-93997600 Strong transcription Fetal Intestine Small intestine
50 chr5:93995800-94000000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015