The 2.0 version of rSNPBase

Variant report

Variant rs67831380
Chromosome Location chr5:94015736-94015737
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:93955800-94027600 Weak transcription NH-A brain
2 chr5:93976800-94025000 Weak transcription Rectal Smooth Muscle rectum
3 chr5:93991200-94049000 Weak transcription H1 Cell Line embryonic stem cell
4 chr5:93994200-94030800 Weak transcription Right Ventricle heart
5 chr5:93994200-94047200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr5:93994400-94022600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr5:93994400-94025400 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr5:93994400-94027600 Weak transcription Liver Liver
9 chr5:93994400-94027600 Weak transcription NHDF-Ad bronchial
10 chr5:93994400-94029000 Weak transcription Brain Hippocampus Middle brain
11 chr5:93994400-94048800 Weak transcription Small Intestine intestine
12 chr5:93994600-94026600 Weak transcription Fetal Kidney kidney
13 chr5:93994600-94029200 Weak transcription Brain Anterior Caudate brain
14 chr5:93994600-94032200 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr5:93995400-94024800 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr5:93995600-94024400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr5:93995600-94033000 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr5:93995600-94050400 Weak transcription Esophagus oesophagus
19 chr5:93996000-94024000 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr5:93996000-94027600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr5:93996000-94036000 Weak transcription GM12878-XiMat blood
22 chr5:93996200-94026600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr5:93996200-94029800 Weak transcription Ovary ovary
24 chr5:93996600-94019200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr5:93996600-94023000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr5:93996600-94027800 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr5:93996600-94048400 Weak transcription Lung lung
28 chr5:93996800-94036200 Weak transcription Gastric stomach
29 chr5:93997000-94033800 Weak transcription Placenta Placenta
30 chr5:94001000-94030000 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr5:94001200-94017600 Weak transcription Primary B cells from cord blood blood
32 chr5:94001200-94022400 Weak transcription Fetal Stomach stomach
33 chr5:94001200-94023000 Weak transcription Adipose Nuclei Adipose
34 chr5:94001400-94016800 Weak transcription Fetal Muscle Leg muscle
35 chr5:94001600-94024200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr5:94001800-94022400 Weak transcription Thymus Thymus
37 chr5:94001800-94027600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr5:94002000-94022200 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr5:94003800-94023000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr5:94004000-94022600 Weak transcription Fetal Intestine Large intestine
41 chr5:94004400-94016800 Weak transcription Fetal Intestine Small intestine
42 chr5:94004600-94022400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr5:94007200-94025800 Weak transcription Brain Cingulate Gyrus brain
44 chr5:94008600-94038600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr5:94008800-94027600 Weak transcription Osteobl bone
46 chr5:94009000-94019400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr5:94009000-94024200 Weak transcription Primary hematopoietic stem cells blood
48 chr5:94009600-94022600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr5:94010600-94027800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr5:94010800-94022200 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015