Variant report

Variant	rs13200495
Chromosome Location	chr6:145956793-145956794
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:145955670..145958489-chr6:145961873..145964489,3	K562	blood:

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10457055	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12190323	0.82[EUR][1000 genomes]
rs12193627	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12195117	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12195987	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12197582	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12198683	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs12199971	0.84[EUR][1000 genomes]
rs12200607	1.00[CEU][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes]
rs12203609	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12205454	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12212636	0.82[EUR][1000 genomes]
rs12214705	1.00[CEU][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes]
rs13196875	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13201738	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs13203662	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13210966	0.89[EUR][1000 genomes]
rs28703599	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34312543	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35587488	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35667536	0.87[EUR][1000 genomes]
rs35807318	0.84[EUR][1000 genomes]
rs6899772	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs71566412	0.85[EUR][1000 genomes]
rs73579446	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9485004	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs952407	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:145948800-145962400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr6:145949000-145968000	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr6:145950800-145977400	Weak transcription	Aorta	Aorta
4	chr6:145950800-145990600	Weak transcription	Primary B cells from cord blood	blood
5	chr6:145951000-145959000	Weak transcription	Fetal Intestine Small	intestine
6	chr6:145951000-146003000	Weak transcription	Thymus	Thymus
7	chr6:145951400-146003000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr6:145952200-145983200	Weak transcription	Primary T cells from cord blood	blood
9	chr6:145953600-145958600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
10	chr6:145955000-145962400	Weak transcription	Psoas Muscle	Psoas
11	chr6:145955200-145976800	Weak transcription	Duodenum Smooth Muscle	Duodenum
12	chr6:145955600-145977400	Weak transcription	Left Ventricle	heart
13	chr6:145955800-145958600	Weak transcription	Fetal Heart	heart
14	chr6:145955800-145959000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood

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