Variant report

Variant	rs13216754
Chromosome Location	chr6:44653210-44653211
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:44647342..44649006-chr6:44651630..44653400,2	K562	blood:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs13195378	1.00[CEU][hapmap]
rs13200237	0.89[EUR][1000 genomes]
rs13200242	0.96[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs13200385	1.00[CEU][hapmap]
rs13200537	0.89[EUR][1000 genomes]
rs13200604	0.89[EUR][1000 genomes]
rs13200624	0.89[EUR][1000 genomes]
rs13203375	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13208173	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13217280	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13220611	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34117335	1.00[AFR][1000 genomes]
rs34362022	1.00[AFR][1000 genomes]
rs34438627	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34613807	0.82[EUR][1000 genomes]
rs34747642	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34948307	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34973168	1.00[CEU][hapmap]
rs35202871	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35254554	0.89[EUR][1000 genomes]
rs35270964	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35440274	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35591728	1.00[EUR][1000 genomes]
rs35939753	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs36010714	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs36092281	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56780396	0.82[EUR][1000 genomes]
rs6905076	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6905326	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6905757	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6910103	1.00[CEU][hapmap]
rs6915967	1.00[CEU][hapmap]
rs6923447	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs71564623	1.00[AFR][1000 genomes]
rs71564625	1.00[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs71564626	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs71564627	1.00[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44652200-44654000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr6:44652600-44653400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr6:44652600-44653600	Enhancers	NHEK	skin
4	chr6:44652600-44653800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr6:44652800-44653600	Enhancers	HMEC	breast

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