Variant report

Variant	rs6905326
Chromosome Location	chr6:44662298-44662299
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs13195378	1.00[CEU][hapmap]
rs13200237	0.89[EUR][1000 genomes]
rs13200242	0.89[EUR][1000 genomes]
rs13200385	1.00[CEU][hapmap]
rs13200537	0.89[EUR][1000 genomes]
rs13200604	0.89[EUR][1000 genomes]
rs13200624	0.89[EUR][1000 genomes]
rs13203375	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13208173	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13216754	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13217280	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13220611	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs227804	0.90[AFR][1000 genomes]
rs227805	0.93[AFR][1000 genomes]
rs34117335	0.82[AFR][1000 genomes]
rs34362022	0.82[AFR][1000 genomes]
rs34438627	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34613807	0.82[EUR][1000 genomes]
rs34747642	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34948307	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34973168	1.00[CEU][hapmap]
rs35202871	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35254554	0.89[EUR][1000 genomes]
rs35270964	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35440274	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35591728	1.00[EUR][1000 genomes]
rs35939753	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs36010714	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs36092281	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56780396	0.82[EUR][1000 genomes]
rs60957511	0.92[AFR][1000 genomes]
rs6905076	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6905757	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6910103	1.00[CEU][hapmap]
rs6915967	1.00[CEU][hapmap]
rs6923447	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs71564623	0.82[AFR][1000 genomes]
rs71564625	0.82[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs71564626	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs71564627	1.00[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44657000-44667200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr6:44660000-44666400	Weak transcription	Right Atrium	heart
3	chr6:44661800-44665200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links