The 2.0 version of rSNPBase

Variant report

Variant rs13254619
Chromosome Location chr8:39916347-39916348
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:39907600-39919000 Enhancers HepG2 liver
2 chr8:39912800-39917200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr8:39912800-39917400 Weak transcription NHLF lung
4 chr8:39912800-39917600 Weak transcription Rectal Smooth Muscle rectum
5 chr8:39912800-39919800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr8:39913000-39916400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr8:39913000-39916400 Weak transcription Esophagus oesophagus
8 chr8:39913000-39917000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr8:39913000-39939000 Weak transcription Right Atrium heart
10 chr8:39913200-39916400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr8:39913200-39916400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr8:39913200-39916400 Weak transcription Lung lung
13 chr8:39913200-39916800 Weak transcription Fetal Lung lung
14 chr8:39913400-39916400 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr8:39913400-39917600 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr8:39913400-39919400 Weak transcription Aorta Aorta
17 chr8:39913600-39916400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr8:39913600-39916400 Weak transcription Colonic Mucosa Colon
19 chr8:39913600-39916400 Weak transcription Duodenum Mucosa Duodenum
20 chr8:39913600-39916400 Weak transcription Small Intestine intestine
21 chr8:39913800-39916400 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr8:39914000-39916400 Weak transcription Fetal Intestine Small intestine
23 chr8:39914000-39916800 Weak transcription Brain Cingulate Gyrus brain
24 chr8:39914000-39917400 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr8:39914200-39916400 Weak transcription Brain Angular Gyrus brain
26 chr8:39914200-39916400 Weak transcription Brain Hippocampus Middle brain
27 chr8:39914200-39916400 Weak transcription Brain Inferior Temporal Lobe brain
28 chr8:39914200-39916400 Weak transcription Brain Substantia Nigra brain
29 chr8:39914200-39916600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr8:39914200-39916600 Weak transcription Fetal Intestine Large intestine
31 chr8:39914200-39916800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr8:39914200-39918600 Weak transcription Liver Liver
33 chr8:39915000-39916400 Weak transcription Pancreas Pancrea
34 chr8:39915200-39920800 Enhancers Stomach Mucosa stomach
35 chr8:39915600-39916800 Weak transcription Brain Anterior Caudate brain
36 chr8:39915600-39916800 Enhancers Hela-S3 cervix
37 chr8:39916200-39916600 Enhancers A549 lung

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Last update: Aug 31, 2015