The 2.0 version of rSNPBase

Variant report

Variant rs34852909
Chromosome Location chr8:39916755-39916756
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:39907600-39919000 Enhancers HepG2 liver
2 chr8:39912800-39917200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr8:39912800-39917400 Weak transcription NHLF lung
4 chr8:39912800-39917600 Weak transcription Rectal Smooth Muscle rectum
5 chr8:39912800-39919800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr8:39913000-39917000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr8:39913000-39939000 Weak transcription Right Atrium heart
8 chr8:39913200-39916800 Weak transcription Fetal Lung lung
9 chr8:39913400-39917600 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr8:39913400-39919400 Weak transcription Aorta Aorta
11 chr8:39914000-39916800 Weak transcription Brain Cingulate Gyrus brain
12 chr8:39914000-39917400 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr8:39914200-39916800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr8:39914200-39918600 Weak transcription Liver Liver
15 chr8:39915200-39920800 Enhancers Stomach Mucosa stomach
16 chr8:39915600-39916800 Weak transcription Brain Anterior Caudate brain
17 chr8:39915600-39916800 Enhancers Hela-S3 cervix
18 chr8:39916400-39916800 Enhancers Lung lung
19 chr8:39916400-39916800 Enhancers Pancreas Pancrea
20 chr8:39916400-39917200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr8:39916400-39917400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr8:39916400-39918400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr8:39916400-39918400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
24 chr8:39916400-39918400 Enhancers Brain Angular Gyrus brain
25 chr8:39916400-39918400 Enhancers HUVEC blood vessel
26 chr8:39916400-39918800 Enhancers Small Intestine intestine
27 chr8:39916400-39919200 Enhancers Fetal Intestine Small intestine
28 chr8:39916400-39919400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
29 chr8:39916400-39919400 Enhancers Brain Hippocampus Middle brain
30 chr8:39916400-39919400 Enhancers Brain Inferior Temporal Lobe brain
31 chr8:39916400-39919400 Enhancers Brain Substantia Nigra brain
32 chr8:39916400-39919400 Enhancers Esophagus oesophagus
33 chr8:39916400-39919800 Enhancers Colonic Mucosa Colon
34 chr8:39916400-39919800 Enhancers Rectal Mucosa Donor 31 rectum
35 chr8:39916400-39920000 Enhancers Duodenum Mucosa Duodenum
36 chr8:39916400-39920000 Enhancers Sigmoid Colon Sigmoid Colon
37 chr8:39916600-39917800 Flanking Active TSS A549 lung
38 chr8:39916600-39918600 Weak transcription Gastric stomach
39 chr8:39916600-39919000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
40 chr8:39916600-39920000 Enhancers Fetal Intestine Large intestine

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Last update: Aug 31, 2015