The 2.0 version of rSNPBase

Variant report

Variant rs1326335
Chromosome Location chr10:22844498-22844499
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:22822200-22856000 Weak transcription Small Intestine intestine
2 chr10:22822800-22870200 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr10:22823000-22844600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
4 chr10:22823400-22845200 Strong transcription Primary monocytes fromperipheralblood blood
5 chr10:22823800-22845200 Strong transcription Primary T helper cells PMA-I stimulated --
6 chr10:22824000-22844800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr10:22824000-22853000 Strong transcription Primary T helper cells fromperipheralblood blood
8 chr10:22824400-22845400 Strong transcription Primary T regulatory cells fromperipheralblood blood
9 chr10:22825000-22852800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr10:22825000-22863800 Weak transcription Hela-S3 cervix
11 chr10:22825600-22888000 Weak transcription HMEC breast
12 chr10:22829000-22887400 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr10:22830600-22853000 Weak transcription HUVEC blood vessel
14 chr10:22830800-22861000 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr10:22831200-22856400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr10:22831800-22852600 Weak transcription A549 lung
17 chr10:22834200-22845400 Strong transcription Primary B cells from peripheral blood blood
18 chr10:22834200-22845400 Strong transcription GM12878-XiMat blood
19 chr10:22834800-22853200 Strong transcription Primary T cells fromperipheralblood blood
20 chr10:22836800-22856200 Weak transcription HepG2 liver
21 chr10:22837200-22848800 Weak transcription Duodenum Mucosa Duodenum
22 chr10:22838000-22851600 Weak transcription Spleen Spleen
23 chr10:22839000-22859400 Strong transcription Primary T cells from cord blood blood
24 chr10:22839400-22855200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr10:22839600-22851600 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr10:22839600-22853400 Weak transcription NHEK skin
27 chr10:22839600-22865200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr10:22839800-22851600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr10:22840200-22852600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr10:22840600-22849000 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr10:22840800-22846400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr10:22840800-22848800 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr10:22840800-22849400 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr10:22840800-22849600 Weak transcription H1 Cell Line embryonic stem cell
35 chr10:22840800-22849600 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr10:22840800-22853000 Weak transcription H9 Cell Line embryonic stem cell
37 chr10:22841000-22853800 Weak transcription K562 blood
38 chr10:22841000-22855200 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr10:22841200-22852200 Weak transcription HUES48 Cell Line embryonic stem cell
40 chr10:22841200-22855400 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr10:22842200-22845400 Strong transcription Fetal Thymus thymus
42 chr10:22842400-22855400 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr10:22842600-22849400 Weak transcription Dnd41 blood
44 chr10:22842800-22844800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr10:22843800-22845000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
46 chr10:22843800-22853000 Weak transcription Esophagus oesophagus
47 chr10:22843800-22855400 Weak transcription Colonic Mucosa Colon
48 chr10:22844000-22844600 Enhancers Fetal Muscle Leg muscle
49 chr10:22844000-22844600 Enhancers Fetal Stomach stomach
50 chr10:22844000-22844800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015