The 2.0 version of rSNPBase

Variant report

Variant rs7087100
Chromosome Location chr10:22852868-22852869
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:22822200-22856000 Weak transcription Small Intestine intestine
2 chr10:22822800-22870200 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr10:22824000-22853000 Strong transcription Primary T helper cells fromperipheralblood blood
4 chr10:22825000-22863800 Weak transcription Hela-S3 cervix
5 chr10:22825600-22888000 Weak transcription HMEC breast
6 chr10:22829000-22887400 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr10:22830600-22853000 Weak transcription HUVEC blood vessel
8 chr10:22830800-22861000 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr10:22831200-22856400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr10:22834800-22853200 Strong transcription Primary T cells fromperipheralblood blood
11 chr10:22836800-22856200 Weak transcription HepG2 liver
12 chr10:22839000-22859400 Strong transcription Primary T cells from cord blood blood
13 chr10:22839400-22855200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr10:22839600-22853400 Weak transcription NHEK skin
15 chr10:22839600-22865200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr10:22840800-22853000 Weak transcription H9 Cell Line embryonic stem cell
17 chr10:22841000-22853800 Weak transcription K562 blood
18 chr10:22841000-22855200 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr10:22841200-22855400 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr10:22842400-22855400 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr10:22843800-22853000 Weak transcription Esophagus oesophagus
22 chr10:22843800-22855400 Weak transcription Colonic Mucosa Colon
23 chr10:22844000-22853000 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr10:22844000-22853000 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr10:22844000-22853000 Weak transcription Osteobl bone
26 chr10:22844000-22855200 Weak transcription Placenta Placenta
27 chr10:22844000-22876600 Weak transcription Right Ventricle heart
28 chr10:22844200-22853000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr10:22844200-22853000 Weak transcription Adipose Nuclei Adipose
30 chr10:22844200-22853200 Weak transcription Fetal Muscle Trunk muscle
31 chr10:22844200-22853200 Weak transcription Lung lung
32 chr10:22844200-22853200 Weak transcription Thymus Thymus
33 chr10:22844200-22855200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr10:22844200-22855400 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr10:22844200-22855400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr10:22844200-22861800 Weak transcription HSMM muscle
37 chr10:22844200-22862400 Weak transcription Stomach Mucosa stomach
38 chr10:22844200-22876200 Weak transcription Ovary ovary
39 chr10:22844200-22877200 Weak transcription Colon Smooth Muscle Colon
40 chr10:22844200-22904800 Weak transcription Rectal Smooth Muscle rectum
41 chr10:22844400-22853000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr10:22844400-22853000 Weak transcription Liver Liver
43 chr10:22844400-22853000 Weak transcription Brain Cingulate Gyrus brain
44 chr10:22844400-22853200 Weak transcription NHDF-Ad bronchial
45 chr10:22844400-22855800 Weak transcription NH-A brain
46 chr10:22844400-22856400 Weak transcription NHLF lung
47 chr10:22844400-22860600 Weak transcription Fetal Kidney kidney
48 chr10:22846200-22857200 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr10:22846200-22862800 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr10:22847400-22854400 Strong transcription GM12878-XiMat blood

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Last update: Aug 31, 2015