Variant report
Variant | rs1331000 |
---|---|
Chromosome Location | chr13:92861219-92861220 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10467331 | 0.94[YRI][hapmap];0.86[AFR][1000 genomes] |
rs1330997 | 0.82[YRI][hapmap] |
rs1330998 | 0.86[YRI][hapmap] |
rs1360390 | 0.93[YRI][hapmap];0.92[AFR][1000 genomes] |
rs1360391 | 1.00[YRI][hapmap];0.96[AFR][1000 genomes] |
rs1360392 | 1.00[YRI][hapmap];0.92[AFR][1000 genomes] |
rs1360393 | 1.00[YRI][hapmap];0.92[AFR][1000 genomes] |
rs28640939 | 1.00[AMR][1000 genomes] |
rs7335648 | 1.00[YRI][hapmap] |
rs7981670 | 0.88[YRI][hapmap] |
rs9301784 | 1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9301785 | 1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9589452 | 1.00[YRI][hapmap] |
rs9589455 | 0.94[YRI][hapmap];1.00[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv2756005 | chr13:92584199-93080799 | Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
2 | nsv456066 | chr13:92694581-92884370 | Enhancers Weak transcription Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
3 | nsv562723 | chr13:92694581-92884370 | Flanking Active TSS Active TSS Enhancers Weak transcription | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
4 | nsv1035365 | chr13:92805325-92926114 | Enhancers Weak transcription Active TSS Flanking Active TSS | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
5 | nsv1053468 | chr13:92814581-92893231 | Enhancers Active TSS Weak transcription Flanking Active TSS | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
No data |