Variant report

Variant	rs1337030
Chromosome Location	chr9:73457861-73457862
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10118602	0.89[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs10119412	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10121631	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10122559	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10124944	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10746856	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10868902	0.88[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs10868903	0.89[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs10868904	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10868905	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10868906	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10868907	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10868910	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11142611	0.86[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs11142612	0.89[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs11142614	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1337027	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1337028	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1337031	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1337032	0.89[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs1415228	0.89[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs1415229	0.87[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs1415230	0.86[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs1415231	0.88[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs1932926	0.89[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs2039640	0.88[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs2039641	0.88[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs2039645	0.89[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs2275242	0.89[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs6560156	0.89[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs6560157	0.89[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs6560158	0.89[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs6560159	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6560160	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6560161	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6560162	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7022926	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7027846	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7847667	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7847940	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7855531	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7855869	0.88[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs7861318	0.89[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs7862440	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7862799	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7863077	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73427600-73483400	Weak transcription	Aorta	Aorta
2	chr9:73442200-73459800	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr9:73448200-73473600	Weak transcription	Fetal Kidney	kidney
4	chr9:73448400-73459200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr9:73448400-73469000	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr9:73450600-73477600	Weak transcription	Ovary	ovary
7	chr9:73452000-73469600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
8	chr9:73455600-73480600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr9:73456000-73461800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr9:73457200-73485200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr9:73457800-73460000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
12	chr9:73457800-73480600	Weak transcription	Cortex derived primary cultured neurospheres	brain

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