The 2.0 version of rSNPBase

Variant report

Variant rs13374352
Chromosome Location chr1:114270738-114270739
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114203200-114298600 Weak transcription Fetal Brain Male brain
2 chr1:114216200-114279800 Weak transcription Stomach Smooth Muscle stomach
3 chr1:114228000-114287800 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr1:114236400-114300000 Weak transcription Small Intestine intestine
5 chr1:114239200-114279800 Weak transcription Colon Smooth Muscle Colon
6 chr1:114240200-114279400 Weak transcription Psoas Muscle Psoas
7 chr1:114242000-114300000 Weak transcription Rectal Smooth Muscle rectum
8 chr1:114245400-114270800 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr1:114245400-114275000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr1:114245600-114300600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr1:114248800-114290200 Weak transcription HMEC breast
12 chr1:114251000-114291400 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr1:114253000-114279400 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr1:114253000-114279600 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr1:114254000-114272200 Weak transcription HSMMtube muscle
16 chr1:114254600-114277000 Weak transcription Adipose Nuclei Adipose
17 chr1:114254800-114271800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr1:114256600-114283600 Weak transcription Brain Anterior Caudate brain
19 chr1:114256600-114288800 Weak transcription K562 blood
20 chr1:114256800-114277200 Weak transcription Brain Inferior Temporal Lobe brain
21 chr1:114257600-114283000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr1:114257600-114296200 Weak transcription Pancreas Pancrea
23 chr1:114258000-114300000 Weak transcription Right Ventricle heart
24 chr1:114261400-114271400 Weak transcription Thymus Thymus
25 chr1:114261400-114277200 Weak transcription HepG2 liver
26 chr1:114261400-114279000 Weak transcription Spleen Spleen
27 chr1:114261400-114300000 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr1:114261400-114300600 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr1:114261400-114301000 Weak transcription Lung lung
30 chr1:114261600-114272200 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr1:114261600-114280200 Weak transcription Brain Cingulate Gyrus brain
32 chr1:114261600-114300200 Weak transcription Brain Angular Gyrus brain
33 chr1:114261600-114300600 Weak transcription Aorta Aorta
34 chr1:114261600-114300600 Weak transcription Esophagus oesophagus
35 chr1:114261600-114300600 Weak transcription Gastric stomach
36 chr1:114262000-114272000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
37 chr1:114262000-114286400 Weak transcription Brain Hippocampus Middle brain
38 chr1:114263600-114285400 Weak transcription Duodenum Mucosa Duodenum
39 chr1:114263600-114300000 Weak transcription Fetal Lung lung
40 chr1:114263600-114300400 Weak transcription Fetal Intestine Large intestine
41 chr1:114263800-114274000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr1:114263800-114277200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr1:114263800-114279200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr1:114263800-114279200 Weak transcription Fetal Muscle Trunk muscle
45 chr1:114263800-114279800 Weak transcription Brain Germinal Matrix brain
46 chr1:114264000-114272000 Weak transcription Primary B cells from cord blood blood
47 chr1:114264000-114277000 Weak transcription Hela-S3 cervix
48 chr1:114264000-114279200 Weak transcription Fetal Kidney kidney
49 chr1:114264000-114300400 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr1:114264200-114271800 Weak transcription NH-A brain

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Last update: Aug 31, 2015