The 2.0 version of rSNPBase

Variant report

Variant rs13375962
Chromosome Location chr1:151919797-151919798
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151913000-151919800 Enhancers Fetal Intestine Large intestine
2 chr1:151914000-151922000 Weak transcription Spleen Spleen
3 chr1:151916400-151919800 Enhancers Rectal Mucosa Donor 31 rectum
4 chr1:151916600-151919800 Enhancers Breast Myoepithelial Primary Cells Breast
5 chr1:151916600-151919800 Enhancers Primary monocytes fromperipheralblood blood
6 chr1:151916600-151919800 Enhancers Muscle Satellite Cultured Cells --
7 chr1:151916600-151919800 Enhancers Fetal Intestine Small intestine
8 chr1:151916800-151919800 Enhancers Primary T helper cells fromperipheralblood blood
9 chr1:151916800-151919800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr1:151916800-151919800 Enhancers HSMM muscle
11 chr1:151916800-151919800 Enhancers NHLF lung
12 chr1:151916800-151920600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
13 chr1:151917000-151920200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:151917200-151919800 Enhancers HSMMtube muscle
15 chr1:151917600-151919800 Enhancers NH-A brain
16 chr1:151917600-151921800 Weak transcription Lung lung
17 chr1:151917600-151921800 Weak transcription Pancreas Pancrea
18 chr1:151918000-151920000 Enhancers Osteobl bone
19 chr1:151918200-151919800 Enhancers Rectal Smooth Muscle rectum
20 chr1:151918200-151920400 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr1:151918800-151920000 Enhancers HUVEC blood vessel
22 chr1:151918800-151925400 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr1:151919000-151920000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:151919000-151920000 Enhancers A549 lung
25 chr1:151919000-151920400 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr1:151919000-151921800 Weak transcription Ovary ovary
27 chr1:151919200-151919800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
28 chr1:151919200-151919800 Enhancers NHDF-Ad bronchial
29 chr1:151919200-151920600 Enhancers HMEC breast
30 chr1:151919200-151922000 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr1:151919400-151920000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr1:151919400-151921000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:151919400-151921200 Weak transcription Adipose Nuclei Adipose
34 chr1:151919600-151919800 Enhancers Primary T helper 17 cells PMA-I stimulated --
35 chr1:151919600-151920000 Weak transcription Fetal Muscle Leg muscle
36 chr1:151919600-151920000 Enhancers Monocytes-CD14+_RO01746 blood
37 chr1:151919600-151920200 Enhancers NHEK skin
38 chr1:151919600-151920800 Weak transcription Esophagus oesophagus
39 chr1:151919600-151921400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr1:151919600-151921400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr1:151919600-151921800 Weak transcription Placenta Amnion Placenta Amnion
42 chr1:151919600-151921800 Enhancers Hela-S3 cervix
43 chr1:151919600-151922200 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr1:151919600-151922800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr1:151919600-151924800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015