Variant report

Variant	rs13376358
Chromosome Location	chr1:221829438-221829439
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:221828900..221831688-chr1:221913117..221915245,2	K562	blood:

Extended variants
information (count: 69 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:64)

rs_ID	r²[population]
rs10082031	0.88[EUR][1000 genomes]
rs10082119	0.88[EUR][1000 genomes]
rs10449312	0.88[EUR][1000 genomes]
rs10495171	0.88[EUR][1000 genomes]
rs11118769	0.88[EUR][1000 genomes]
rs11118771	0.88[EUR][1000 genomes]
rs12058091	0.88[EUR][1000 genomes]
rs12063275	0.88[EUR][1000 genomes]
rs12063464	0.88[EUR][1000 genomes]
rs12064012	0.88[EUR][1000 genomes]
rs12064162	0.88[EUR][1000 genomes]
rs12067974	0.88[EUR][1000 genomes]
rs12075242	0.88[EUR][1000 genomes]
rs12079769	0.88[EUR][1000 genomes]
rs12081273	0.88[EUR][1000 genomes]
rs12081326	0.88[EUR][1000 genomes]
rs12082182	0.88[EUR][1000 genomes]
rs12082815	0.88[EUR][1000 genomes]
rs12082874	0.88[EUR][1000 genomes]
rs12084065	0.88[EUR][1000 genomes]
rs12086252	0.88[EUR][1000 genomes]
rs12086291	0.88[EUR][1000 genomes]
rs12088112	0.88[EUR][1000 genomes]
rs12089796	0.88[EUR][1000 genomes]
rs12092891	0.88[EUR][1000 genomes]
rs12093053	0.88[EUR][1000 genomes]
rs12094911	0.88[EUR][1000 genomes]
rs12095828	0.88[EUR][1000 genomes]
rs12095905	0.88[EUR][1000 genomes]
rs1342088	0.81[ASN][1000 genomes]
rs17010395	0.88[EUR][1000 genomes]
rs17010397	0.88[EUR][1000 genomes]
rs17010409	0.88[EUR][1000 genomes]
rs17010428	0.88[EUR][1000 genomes]
rs17010434	0.88[EUR][1000 genomes]
rs17010457	0.88[EUR][1000 genomes]
rs17010463	0.88[EUR][1000 genomes]
rs17010484	0.89[ASN][1000 genomes]
rs1890243	0.88[EUR][1000 genomes]
rs1973728	0.88[EUR][1000 genomes]
rs28515661	0.88[EUR][1000 genomes]
rs56971545	0.88[EUR][1000 genomes]
rs57255089	0.88[EUR][1000 genomes]
rs58173559	0.88[EUR][1000 genomes]
rs58482927	0.88[EUR][1000 genomes]
rs59383649	0.88[EUR][1000 genomes]
rs59680640	0.88[EUR][1000 genomes]
rs59837278	0.88[EUR][1000 genomes]
rs60152531	0.88[EUR][1000 genomes]
rs60217573	0.88[EUR][1000 genomes]
rs61079406	0.88[EUR][1000 genomes]
rs73117552	1.00[EUR][1000 genomes]
rs74145360	0.88[EUR][1000 genomes]
rs74145363	0.88[EUR][1000 genomes]
rs74145364	0.88[EUR][1000 genomes]
rs74145365	0.88[EUR][1000 genomes]
rs74145366	0.88[EUR][1000 genomes]
rs74145367	0.88[EUR][1000 genomes]
rs74145373	0.82[EUR][1000 genomes]
rs74145375	0.88[EUR][1000 genomes]
rs74145376	0.82[EUR][1000 genomes]
rs74145378	0.88[EUR][1000 genomes]
rs74145400	0.88[EUR][1000 genomes]
rs9308402	0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv997685	chr1:220993527-221863416	Enhancers Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
2	nsv535299	chr1:220993527-221863416	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
3	nsv873200	chr1:221644180-221843191	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	esv3340395	chr1:221827809-221832266	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3347358	chr1:221827992-221829569	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:221828200-221830400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
2	chr1:221829200-221830400	Enhancers	K562	blood

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