The 2.0 version of rSNPBase

Variant report

Variant rs13376985
Chromosome Location chr10:91386554-91386555
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:91345000-91392800 Weak transcription Hela-S3 cervix
2 chr10:91351600-91403400 Weak transcription Esophagus oesophagus
3 chr10:91352600-91403400 Weak transcription Small Intestine intestine
4 chr10:91353800-91403800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr10:91359400-91393000 Weak transcription NHEK skin
6 chr10:91359800-91403200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr10:91370200-91403200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr10:91371000-91392800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr10:91371400-91389400 Weak transcription A549 lung
10 chr10:91371800-91389400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr10:91371800-91393600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr10:91371800-91401600 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr10:91371800-91403200 Weak transcription HSMMtube muscle
14 chr10:91372000-91393400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr10:91376000-91394200 Weak transcription Primary T cells from cord blood blood
16 chr10:91380600-91403200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr10:91381600-91390600 Weak transcription Fetal Stomach stomach
18 chr10:91381800-91392000 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr10:91382000-91386600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr10:91383200-91389800 Enhancers Fetal Heart heart
21 chr10:91383800-91392800 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr10:91383800-91392800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr10:91383800-91393400 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr10:91383800-91402600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr10:91384000-91394600 Weak transcription Dnd41 blood
26 chr10:91384400-91393600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr10:91384800-91392600 Weak transcription Psoas Muscle Psoas
28 chr10:91385000-91387800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr10:91385000-91393600 Weak transcription Left Ventricle heart
30 chr10:91385000-91393800 Weak transcription H1 Cell Line embryonic stem cell
31 chr10:91385000-91403000 Weak transcription Fetal Muscle Trunk muscle
32 chr10:91385200-91391000 Weak transcription Fetal Intestine Small intestine
33 chr10:91385400-91388600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr10:91385400-91389400 Weak transcription HepG2 liver
35 chr10:91385400-91391800 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr10:91385400-91393000 Weak transcription HSMM muscle
37 chr10:91385400-91403000 Weak transcription Primary hematopoietic stem cells blood
38 chr10:91385600-91387600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr10:91385600-91402800 Weak transcription Fetal Muscle Leg muscle
40 chr10:91385800-91386600 Enhancers H9 Cell Line embryonic stem cell
41 chr10:91385800-91386600 Enhancers Right Atrium heart
42 chr10:91385800-91387000 Enhancers Breast Myoepithelial Primary Cells Breast
43 chr10:91385800-91387800 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr10:91385800-91389400 Enhancers Liver Liver
45 chr10:91385800-91395600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr10:91385800-91403200 Weak transcription Fetal Brain Male brain
47 chr10:91386000-91387000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr10:91386000-91387800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr10:91386000-91388600 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr10:91386000-91389600 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015