The 2.0 version of rSNPBase

Variant report

Variant rs13384392
Chromosome Location chr2:182795971-182795972
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:182779600-182796000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr2:182781000-182796000 Weak transcription Psoas Muscle Psoas
3 chr2:182781000-182796400 Weak transcription Esophagus oesophagus
4 chr2:182781800-182796000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr2:182781800-182797000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr2:182782600-182812800 Weak transcription Aorta Aorta
7 chr2:182784200-182796000 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr2:182787200-182796200 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr2:182787200-182796400 Weak transcription Colonic Mucosa Colon
10 chr2:182787400-182796400 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr2:182787600-182796800 Weak transcription Primary T cells fromperipheralblood blood
12 chr2:182787600-182806200 Weak transcription Placenta Amnion Placenta Amnion
13 chr2:182788000-182796400 Weak transcription Stomach Smooth Muscle stomach
14 chr2:182788200-182797800 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr2:182790000-182796000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr2:182790000-182799400 Weak transcription Brain Anterior Caudate brain
17 chr2:182790400-182799000 Weak transcription Colon Smooth Muscle Colon
18 chr2:182790600-182796000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr2:182790600-182796600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr2:182790600-182798600 Weak transcription GM12878-XiMat blood
21 chr2:182790600-182800000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr2:182790600-182808800 Weak transcription Fetal Lung lung
23 chr2:182790800-182796200 Weak transcription K562 blood
24 chr2:182790800-182797400 Weak transcription HSMMtube muscle
25 chr2:182790800-182802200 Weak transcription NHEK skin
26 chr2:182791000-182796600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr2:182791000-182799600 Weak transcription HepG2 liver
28 chr2:182791200-182797200 Weak transcription Fetal Muscle Leg muscle
29 chr2:182791200-182807000 Weak transcription Left Ventricle heart
30 chr2:182791400-182796000 Weak transcription Fetal Intestine Small intestine
31 chr2:182791400-182797000 Weak transcription Pancreas Pancrea
32 chr2:182791400-182798200 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr2:182791400-182799600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr2:182791400-182809000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr2:182791800-182797600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr2:182792200-182796000 Strong transcription NH-A brain
37 chr2:182792200-182796800 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr2:182792800-182797000 Weak transcription Primary hematopoietic stem cells blood
39 chr2:182792800-182798400 Weak transcription Primary B cells from cord blood blood
40 chr2:182793000-182796400 Weak transcription A549 lung
41 chr2:182794000-182797600 Strong transcription HUVEC blood vessel
42 chr2:182794400-182796000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr2:182794600-182796000 Strong transcription HMEC breast
44 chr2:182794800-182797200 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr2:182794800-182799600 Weak transcription Fetal Intestine Large intestine
46 chr2:182794800-182808800 Weak transcription Fetal Thymus thymus
47 chr2:182795000-182796600 Weak transcription Adipose Nuclei Adipose
48 chr2:182795000-182796600 Weak transcription Brain Cingulate Gyrus brain
49 chr2:182795000-182797200 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr2:182795000-182797200 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015