Variant report

Variant	rs13387839
Chromosome Location	chr2:63428571-63428572
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 220 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:213)

rs_ID	r²[population]
rs10169209	1.00[CHB][hapmap];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10169292	0.89[CEU][hapmap];1.00[CHB][hapmap];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10169579	0.93[ASN][1000 genomes]
rs10173637	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10182596	1.00[CHB][hapmap]
rs10201254	0.83[EUR][1000 genomes]
rs10203263	0.84[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.87[MKK][hapmap];1.00[YRI][hapmap];1.00[ASN][1000 genomes]
rs10207356	0.94[CEU][hapmap];1.00[CHB][hapmap];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10209822	0.84[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.92[TSI][hapmap];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11125957	0.84[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11125965	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11125967	0.94[CEU][hapmap];0.81[EUR][1000 genomes]
rs11675647	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11684108	0.94[CEU][hapmap];1.00[CHB][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11685910	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11686044	0.89[CEU][hapmap];1.00[CHB][hapmap];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11691166	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11691357	0.89[CEU][hapmap];1.00[CHB][hapmap];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11691718	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11883730	0.84[ASW][hapmap];0.89[CEU][hapmap];0.96[GIH][hapmap];0.92[TSI][hapmap]
rs11894445	0.94[CEU][hapmap];0.81[EUR][1000 genomes]
rs12151606	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[MKK][hapmap];0.94[TSI][hapmap];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12329383	0.86[ASW][hapmap]
rs12612773	0.88[EUR][1000 genomes]
rs12618974	0.94[CEU][hapmap];1.00[CHB][hapmap];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12623431	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12713476	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12713477	0.94[CEU][hapmap];1.00[CHB][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12713478	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12992737	0.83[EUR][1000 genomes]
rs12994711	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13011799	0.94[CEU][hapmap];1.00[CHB][hapmap];0.81[EUR][1000 genomes]
rs13020171	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13411657	1.00[ASN][1000 genomes]
rs13417792	0.84[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];0.86[MEX][hapmap];0.87[MKK][hapmap];0.82[YRI][hapmap];1.00[ASN][1000 genomes]
rs13422328	1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs13427868	0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs13431765	0.84[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1356389	0.84[EUR][1000 genomes]
rs1400686	0.84[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.94[TSI][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1400687	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.94[TSI][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1400688	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1517401	0.88[CEU][hapmap];1.00[CHB][hapmap];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1517402	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1517404	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1517405	0.84[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.94[TSI][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1517406	0.87[MKK][hapmap]
rs1517407	0.80[MKK][hapmap]
rs1517408	0.87[MKK][hapmap]
rs1517409	0.89[CEU][hapmap];1.00[CHB][hapmap];0.81[EUR][1000 genomes]
rs1568175	0.81[EUR][1000 genomes]
rs1589092	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1607203	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1607204	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1607205	0.84[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1607206	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1607207	0.81[EUR][1000 genomes]
rs17348134	1.00[ASN][1000 genomes]
rs17408652	1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.86[MEX][hapmap];0.83[TSI][hapmap];0.86[ASN][1000 genomes]
rs17408841	1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.86[MKK][hapmap];0.86[ASN][1000 genomes]
rs17432684	1.00[ASN][1000 genomes]
rs17432775	1.00[CHB][hapmap];0.86[ASN][1000 genomes]
rs1829261	0.89[CEU][hapmap]
rs1850984	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];1.00[ASN][1000 genomes]
rs1922421	0.89[CEU][hapmap]
rs2030188	0.94[CEU][hapmap];1.00[CHB][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2030189	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2030190	0.85[EUR][1000 genomes]
rs2090478	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2090479	0.84[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[GIH][hapmap];0.91[TSI][hapmap];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2176416	0.94[CEU][hapmap];0.80[EUR][1000 genomes]
rs2176417	0.89[CEU][hapmap];1.00[CHB][hapmap];0.86[ASN][1000 genomes]
rs2176418	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.94[TSI][hapmap];0.81[EUR][1000 genomes]
rs2263636	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.86[MEX][hapmap];0.91[TSI][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2292794	0.84[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];0.94[TSI][hapmap];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2292795	0.84[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];0.84[MKK][hapmap];0.92[TSI][hapmap];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2421862	0.84[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];0.82[MKK][hapmap];0.83[TSI][hapmap];0.86[ASN][1000 genomes]
rs2421881	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2421883	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2421884	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2421886	0.94[CEU][hapmap];1.00[CHB][hapmap];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2421887	0.94[CEU][hapmap];1.00[CHB][hapmap];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2464042	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2677436	0.94[CEU][hapmap];1.00[CHB][hapmap];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2677437	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2677438	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2677439	0.84[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap]
rs2677442	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2699388	0.94[CEU][hapmap];1.00[CHB][hapmap];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2699389	0.82[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2699390	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2699391	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2699396	0.87[MKK][hapmap]
rs2699399	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2901580	1.00[CEU][hapmap];1.00[CHB][hapmap];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2945032	0.94[CEU][hapmap];1.00[CHB][hapmap];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2951185	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2951186	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2951192	0.94[CEU][hapmap];1.00[CHB][hapmap];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4313961	0.80[CEU][hapmap];1.00[CHB][hapmap];0.86[EUR][1000 genomes]
rs4353635	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4416201	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4428008	0.94[CEU][hapmap];1.00[CHB][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4429457	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4560098	0.94[CEU][hapmap];1.00[CHB][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4578846	0.89[CEU][hapmap];1.00[CHB][hapmap];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4602212	0.85[EUR][1000 genomes]
rs4611627	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4613259	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4671468	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4671470	0.94[CEU][hapmap];1.00[CHB][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4671471	0.94[CEU][hapmap];1.00[CHB][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4671472	0.94[CEU][hapmap];1.00[CHB][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4671473	0.94[CEU][hapmap];1.00[CHB][hapmap];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4671474	0.84[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.94[TSI][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4671475	1.00[CHB][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4671476	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4671479	0.84[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.94[TSI][hapmap];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4671480	0.89[CEU][hapmap];1.00[CHB][hapmap];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4671481	0.89[CEU][hapmap];1.00[CHB][hapmap];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4671482	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4671483	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4671484	0.89[CEU][hapmap];1.00[CHB][hapmap];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4671485	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4671487	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4671488	0.89[CEU][hapmap];1.00[CHB][hapmap];0.86[ASN][1000 genomes]
rs4671494	0.89[CEU][hapmap];1.00[CHB][hapmap]
rs58483312	1.00[ASN][1000 genomes]
rs62177761	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62177762	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62177774	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62177782	1.00[ASN][1000 genomes]
rs62177783	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62177787	0.86[ASN][1000 genomes]
rs62177789	1.00[ASN][1000 genomes]
rs62177790	1.00[ASN][1000 genomes]
rs62177791	1.00[ASN][1000 genomes]
rs62177793	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62177795	1.00[ASN][1000 genomes]
rs62177797	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62177820	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62177821	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62177824	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62180316	0.86[ASN][1000 genomes]
rs62180317	0.86[ASN][1000 genomes]
rs62180320	0.86[ASN][1000 genomes]
rs62180322	1.00[ASN][1000 genomes]
rs62180323	1.00[ASN][1000 genomes]
rs62180324	1.00[ASN][1000 genomes]
rs62180325	0.89[ASN][1000 genomes]
rs6545984	0.84[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];0.87[CHD][hapmap];0.91[GIH][hapmap];0.82[MKK][hapmap];0.97[TSI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6545985	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6545986	0.84[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.94[TSI][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6545988	0.82[EUR][1000 genomes]
rs6545989	0.85[CEU][hapmap];1.00[CHB][hapmap];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6545991	0.89[CEU][hapmap];1.00[CHB][hapmap];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6545992	0.82[EUR][1000 genomes]
rs6545997	0.84[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.94[TSI][hapmap];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6546001	0.94[CEU][hapmap];0.81[EUR][1000 genomes]
rs6546002	0.94[CEU][hapmap]
rs6704562	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6705322	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6705776	0.94[CEU][hapmap];1.00[CHB][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6706180	0.84[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];0.95[GIH][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6706424	1.00[CHB][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6708627	0.89[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6708847	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6709115	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6711248	0.82[EUR][1000 genomes]
rs6713500	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6714139	0.83[EUR][1000 genomes]
rs6714298	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6717060	0.89[CEU][hapmap];1.00[CHB][hapmap];0.86[ASN][1000 genomes]
rs6718609	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs6719375	0.82[EUR][1000 genomes]
rs6724044	0.84[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.82[MKK][hapmap];0.94[TSI][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6725694	0.84[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.94[TSI][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6728844	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6729132	0.89[EUR][1000 genomes]
rs6734468	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6736788	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6737820	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6741817	0.94[CEU][hapmap];1.00[CHB][hapmap]
rs6744720	0.94[CEU][hapmap];1.00[CHB][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6748030	0.94[CEU][hapmap];1.00[CHB][hapmap]
rs6755183	0.89[EUR][1000 genomes]
rs6755412	0.82[EUR][1000 genomes]
rs6757463	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6757487	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7349440	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7558796	0.94[CEU][hapmap];1.00[CHB][hapmap];0.81[EUR][1000 genomes]
rs7558922	0.84[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.94[TSI][hapmap];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7559137	0.84[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.94[TSI][hapmap];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7561802	0.84[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.94[TSI][hapmap];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7567088	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7568224	1.00[CHB][hapmap];0.86[ASN][1000 genomes]
rs7570649	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7571697	0.94[CEU][hapmap];1.00[CHB][hapmap];0.81[EUR][1000 genomes]
rs7582434	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7585664	0.84[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.94[TSI][hapmap];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7591562	0.84[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.94[TSI][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7596446	0.84[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[MEX][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7596580	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7599736	0.84[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.88[GIH][hapmap];0.94[TSI][hapmap];0.87[EUR][1000 genomes]
rs7605113	0.89[EUR][1000 genomes]
rs7605319	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7608966	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs908621	0.94[CEU][hapmap];1.00[CHB][hapmap];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs908622	0.94[CEU][hapmap];1.00[CHB][hapmap];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs932171	0.94[CEU][hapmap];1.00[CHB][hapmap]
rs932172	0.94[CEU][hapmap];1.00[CHB][hapmap];0.81[EUR][1000 genomes]
rs970278	0.94[CEU][hapmap];1.00[CHB][hapmap]
rs9967684	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3417336	chr2:62957866-63749654	Strong transcription Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	nsv1006848	chr2:63061816-63631407	Weak transcription Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
3	esv2756598	chr2:63085848-63491438	Strong transcription Bivalent/Poised TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
4	esv3340700	chr2:63127412-63534998	Bivalent Enhancer Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
5	nsv1004678	chr2:63230722-63562484	Weak transcription Bivalent Enhancer ZNF genes & repeats Strong transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
6	nsv470468	chr2:63374063-63449512	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
7	nsv535768	chr2:63413596-63631407	Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs13387839	LOC51057	cis	multi-tissue	Pritchard
rs13387839	MDH1	cis	Adipose Subcutaneous	GTEx
rs13387839	WDPCP	cis	Adipose Subcutaneous	GTEx

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:63416400-63435800	Weak transcription	Ovary	ovary
2	chr2:63416600-63433600	Weak transcription	Aorta	Aorta
3	chr2:63425400-63430600	Weak transcription	Gastric	stomach
4	chr2:63428400-63428600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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