Variant report

Variant	rs13390758
Chromosome Location	chr2:172987675-172987676
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs12466775	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12468831	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12692981	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs13009919	0.82[EUR][1000 genomes]
rs13010989	0.81[EUR][1000 genomes]
rs13015819	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1843757	0.88[EUR][1000 genomes]
rs2357318	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2884155	0.82[EUR][1000 genomes]
rs34158453	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35412286	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35547635	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7582678	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:172986800-172989600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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