The 2.0 version of rSNPBase

Variant report

Variant rs13397192
Chromosome Location chr2:55360233-55360234
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55347600-55360600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr2:55348200-55360600 Weak transcription Stomach Mucosa stomach
3 chr2:55348400-55360400 Weak transcription HUES6 Cell Line embryonic stem cell
4 chr2:55348600-55360800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr2:55348800-55360400 Weak transcription NHDF-Ad bronchial
6 chr2:55349800-55360600 Weak transcription Fetal Stomach stomach
7 chr2:55350000-55360600 Weak transcription Psoas Muscle Psoas
8 chr2:55350000-55360800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr2:55350000-55360800 Weak transcription Lung lung
10 chr2:55350000-55360800 Weak transcription Ovary ovary
11 chr2:55351400-55360600 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr2:55351400-55360600 Weak transcription HSMMtube muscle
13 chr2:55351600-55360400 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr2:55354800-55360600 Weak transcription Brain Angular Gyrus brain
15 chr2:55355400-55360600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr2:55355600-55360600 Weak transcription Fetal Muscle Leg muscle
17 chr2:55355800-55360600 Weak transcription Brain Cingulate Gyrus brain
18 chr2:55355800-55360600 Weak transcription Brain Substantia Nigra brain
19 chr2:55356800-55360400 Weak transcription Brain Hippocampus Middle brain
20 chr2:55356800-55360400 Weak transcription K562 blood
21 chr2:55356800-55360600 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr2:55357000-55360600 Weak transcription Brain Inferior Temporal Lobe brain
23 chr2:55357200-55360400 Weak transcription Monocytes-CD14+_RO01746 blood
24 chr2:55357200-55360800 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr2:55357400-55360600 Weak transcription HepG2 liver
26 chr2:55359800-55360600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr2:55360200-55360400 Enhancers Primary monocytes fromperipheralblood blood
28 chr2:55360200-55360400 Enhancers Primary T cells from cord blood blood
29 chr2:55360200-55360400 Enhancers Primary hematopoietic stem cells blood
30 chr2:55360200-55360400 Enhancers Primary T regulatory cells fromperipheralblood blood
31 chr2:55360200-55360400 Enhancers Primary T killer memory cells from peripheral blood blood
32 chr2:55360200-55360400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr2:55360200-55360400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr2:55360200-55360400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr2:55360200-55360600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
36 chr2:55360200-55360600 Enhancers iPS-18 Cell Line embryonic stem cell
37 chr2:55360200-55360600 Enhancers Primary neutrophils fromperipheralblood blood
38 chr2:55360200-55360600 Enhancers Primary T cells fromperipheralblood blood
39 chr2:55360200-55360600 Enhancers Primary hematopoietic stem cells short term culture blood
40 chr2:55360200-55360600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
41 chr2:55360200-55360600 Enhancers Primary T helper cells fromperipheralblood blood
42 chr2:55360200-55361400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015