Variant report

Variant	rs6714383
Chromosome Location	chr2:55352690-55352691
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:55347650..55349740-chr2:55350733..55352941,2	K562	blood:

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1009555	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10175851	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13397192	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13409560	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4588228	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6722862	1.00[CHB][hapmap]
rs67296270	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67437655	1.00[ASN][1000 genomes]
rs6744220	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7574696	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7578257	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:55347600-55360600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr2:55348200-55360600	Weak transcription	Stomach Mucosa	stomach
3	chr2:55348400-55360400	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr2:55348600-55360800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr2:55348800-55360400	Weak transcription	NHDF-Ad	bronchial
6	chr2:55349800-55360600	Weak transcription	Fetal Stomach	stomach
7	chr2:55350000-55355200	Weak transcription	Fetal Muscle Leg	muscle
8	chr2:55350000-55360600	Weak transcription	Psoas Muscle	Psoas
9	chr2:55350000-55360800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr2:55350000-55360800	Weak transcription	Lung	lung
11	chr2:55350000-55360800	Weak transcription	Ovary	ovary
12	chr2:55350200-55354400	Weak transcription	K562	blood
13	chr2:55350200-55355200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
14	chr2:55350200-55356400	Weak transcription	Monocytes-CD14+_RO01746	blood
15	chr2:55351200-55359600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr2:55351400-55360600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
17	chr2:55351400-55360600	Weak transcription	HSMMtube	muscle
18	chr2:55351600-55354600	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr2:55351600-55360400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
20	chr2:55351800-55354400	Weak transcription	Brain Angular Gyrus	brain
21	chr2:55351800-55354600	Weak transcription	Brain Cingulate Gyrus	brain
22	chr2:55351800-55354600	Weak transcription	Brain Substantia Nigra	brain
23	chr2:55352400-55354400	Weak transcription	Brain Hippocampus Middle	brain

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