Variant report

Variant	rs13418681
Chromosome Location	chr2:73435637-73435638
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10181329	1.00[AMR][1000 genomes]
rs10184355	1.00[YRI][hapmap]
rs10193012	1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13401401	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13402667	1.00[AMR][1000 genomes]
rs13402757	1.00[AMR][1000 genomes]
rs13410865	1.00[AMR][1000 genomes]
rs13423968	1.00[AMR][1000 genomes]
rs2231438	1.00[AMR][1000 genomes]
rs59986490	1.00[AMR][1000 genomes]
rs60303012	1.00[AMR][1000 genomes]
rs60314377	1.00[AMR][1000 genomes]
rs61736525	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv2776	chr2:73431854-73482304	Flanking Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA target site	26 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:73434600-73436600	Weak transcription	Spleen	Spleen
2	chr2:73435200-73435800	Flanking Active TSS	HepG2	liver
3	chr2:73435600-73435800	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr2:73435600-73435800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
5	chr2:73435600-73438600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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