The 2.0 version of rSNPBase

Variant report

Variant rs13429652
Chromosome Location chr2:64216339-64216340
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:64139800-64220600 Weak transcription Brain Cingulate Gyrus brain
2 chr2:64154800-64242600 Weak transcription Aorta Aorta
3 chr2:64176000-64228000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr2:64185800-64245000 Weak transcription H9 Cell Line embryonic stem cell
5 chr2:64194000-64243200 Weak transcription NHLF lung
6 chr2:64198600-64228000 Weak transcription Right Ventricle heart
7 chr2:64202800-64232400 Weak transcription Stomach Smooth Muscle stomach
8 chr2:64203200-64228400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr2:64203400-64228000 Weak transcription Ovary ovary
10 chr2:64203600-64216400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr2:64203600-64218800 Weak transcription Gastric stomach
12 chr2:64203600-64221400 Weak transcription HMEC breast
13 chr2:64204200-64227600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr2:64205200-64216800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr2:64205600-64217600 Weak transcription Osteobl bone
16 chr2:64205600-64220800 Weak transcription Thymus Thymus
17 chr2:64205600-64228000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr2:64209000-64229200 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr2:64209200-64219400 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr2:64209400-64244800 Weak transcription HSMM muscle
21 chr2:64210000-64216600 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr2:64210200-64216400 Weak transcription Left Ventricle heart
23 chr2:64210200-64216600 Weak transcription Fetal Lung lung
24 chr2:64210200-64220400 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr2:64210200-64221200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr2:64210200-64222000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr2:64210200-64243000 Weak transcription Muscle Satellite Cultured Cells --
28 chr2:64211400-64216600 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr2:64211800-64217200 Weak transcription Dnd41 blood
30 chr2:64212000-64216600 Weak transcription Primary T cells from cord blood blood
31 chr2:64212600-64216800 Weak transcription GM12878-XiMat blood
32 chr2:64212600-64217200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr2:64212600-64218600 Weak transcription Pancreas Pancrea
34 chr2:64212600-64222200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr2:64212800-64216800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr2:64212800-64228400 Weak transcription NHEK skin
37 chr2:64213000-64224200 Weak transcription A549 lung
38 chr2:64213600-64218400 Weak transcription Liver Liver
39 chr2:64213600-64222600 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr2:64213800-64244600 Weak transcription HUVEC blood vessel
41 chr2:64215800-64217000 ZNF genes & repeats Primary hematopoietic stem cells blood
42 chr2:64215800-64217800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr2:64215800-64218000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr2:64216000-64217800 ZNF genes & repeats Fetal Muscle Leg muscle
45 chr2:64216000-64222600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr2:64216200-64216600 ZNF genes & repeats Fetal Intestine Small intestine
47 chr2:64216200-64217400 ZNF genes & repeats Primary B cells from peripheral blood blood
48 chr2:64216200-64217400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
49 chr2:64216200-64217400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
50 chr2:64216200-64217400 ZNF genes & repeats Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015