The 2.0 version of rSNPBase

Variant report

Variant rs13405024
Chromosome Location chr2:64128514-64128515
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:64083000-64129200 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr2:64103800-64130400 Weak transcription Stomach Mucosa stomach
3 chr2:64107200-64130000 Strong transcription Primary neutrophils fromperipheralblood blood
4 chr2:64107400-64129600 Strong transcription Rectal Mucosa Donor 31 rectum
5 chr2:64107600-64128800 Strong transcription Primary monocytes fromperipheralblood blood
6 chr2:64107600-64129200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr2:64109400-64129000 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr2:64109800-64128600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr2:64112800-64129600 Strong transcription NH-A brain
10 chr2:64114000-64128800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr2:64114000-64129200 Weak transcription Fetal Brain Male brain
12 chr2:64114000-64130600 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr2:64114000-64212000 Weak transcription Small Intestine intestine
14 chr2:64114200-64174800 Weak transcription Right Ventricle heart
15 chr2:64115800-64129200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr2:64116000-64128800 Weak transcription Aorta Aorta
17 chr2:64116000-64129200 Weak transcription Spleen Spleen
18 chr2:64116400-64129200 Weak transcription Pancreas Pancrea
19 chr2:64116800-64138600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr2:64118200-64153600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr2:64118400-64128600 Weak transcription Esophagus oesophagus
22 chr2:64118400-64137800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr2:64119200-64130200 Weak transcription Brain Inferior Temporal Lobe brain
24 chr2:64119200-64130200 Weak transcription Colon Smooth Muscle Colon
25 chr2:64119200-64132800 Weak transcription Brain Hippocampus Middle brain
26 chr2:64119400-64133200 Weak transcription Brain Anterior Caudate brain
27 chr2:64119600-64128600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr2:64119600-64129400 Strong transcription Breast Myoepithelial Primary Cells Breast
29 chr2:64119600-64129400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr2:64119600-64129800 Strong transcription HepG2 liver
31 chr2:64119600-64139600 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr2:64119800-64129200 Weak transcription Fetal Brain Female brain
33 chr2:64120800-64128600 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr2:64121000-64129800 Weak transcription H1 Cell Line embryonic stem cell
35 chr2:64121600-64128600 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr2:64121600-64129400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr2:64122000-64129200 Weak transcription NHEK skin
38 chr2:64122600-64129600 Strong transcription Fetal Adrenal Gland Adrenal Gland
39 chr2:64122800-64129400 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr2:64123000-64128600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr2:64123200-64128600 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr2:64123800-64129200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr2:64124600-64129200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr2:64124600-64129200 Weak transcription Hela-S3 cervix
45 chr2:64124800-64128600 Weak transcription NHLF lung
46 chr2:64124800-64129200 Strong transcription Muscle Satellite Cultured Cells --
47 chr2:64125200-64128600 Strong transcription Cortex derived primary cultured neurospheres brain
48 chr2:64125200-64129000 Strong transcription Fetal Muscle Leg muscle
49 chr2:64125200-64129400 Strong transcription Fetal Muscle Trunk muscle
50 chr2:64125200-64129600 Strong transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015