Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:34608832..34611723-chr11:34620873..34624079,3	K562	blood:
2	chr11:34608087..34610149-chr11:34610286..34613011,2	K562	blood:

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1551291	0.88[MEX][hapmap];1.00[TSI][hapmap];0.91[AMR][1000 genomes]
rs16925929	1.00[CHD][hapmap]
rs286946	0.80[AMR][1000 genomes]
rs286949	0.80[AMR][1000 genomes]
rs286950	0.80[AMR][1000 genomes]
rs286952	0.80[AMR][1000 genomes]
rs55815243	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56267737	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58418741	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58684591	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59692197	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60079521	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60324781	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7122724	1.00[CHD][hapmap];0.85[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv897207	chr11:34253683-34621004	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
2	nsv897212	chr11:34523173-34621004	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv832116	chr11:34539536-34673900	Flanking Active TSS Enhancers Active TSS Weak transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:34606400-34610200	Enhancers	Fetal Intestine Small	intestine
2	chr11:34607200-34610000	Enhancers	Hela-S3	cervix
3	chr11:34608000-34610000	Enhancers	HepG2	liver
4	chr11:34608000-34610200	Enhancers	Placenta	Placenta
5	chr11:34608200-34610800	Enhancers	K562	blood
6	chr11:34608200-34611800	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr11:34608400-34610000	Enhancers	Rectal Mucosa Donor 31	rectum
8	chr11:34608400-34610200	Enhancers	A549	lung
9	chr11:34608400-34611400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr11:34608400-34613800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr11:34608400-34618400	Weak transcription	Duodenum Mucosa	Duodenum
12	chr11:34608400-34643600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr11:34609200-34614200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr11:34609400-34610000	Enhancers	Primary monocytes fromperipheralblood	blood
15	chr11:34609600-34611800	Weak transcription	Pancreas	Pancrea
16	chr11:34609600-34619200	Weak transcription	Fetal Heart	heart
17	chr11:34609600-34620800	Weak transcription	Esophagus	oesophagus
18	chr11:34609800-34611600	Weak transcription	NHEK	skin
19	chr11:34609800-34614000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr11:34609800-34616000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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