Variant report
| Variant | rs1399241 |
|---|---|
| Chromosome Location | chr4:54349307-54349308 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:54320000-54353200 | Weak transcription | Gastric | stomach |
| 2 | chr4:54327800-54362200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 3 | chr4:54328200-54362000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 4 | chr4:54328400-54362000 | Weak transcription | Brain Angular Gyrus | brain |
| 5 | chr4:54329600-54351000 | Weak transcription | Adipose Nuclei | Adipose |
| 6 | chr4:54329600-54373600 | Weak transcription | Brain Germinal Matrix | brain |
| 7 | chr4:54329800-54374000 | Weak transcription | Left Ventricle | heart |
| 8 | chr4:54333000-54363600 | Weak transcription | Aorta | Aorta |
| 9 | chr4:54333000-54374800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 10 | chr4:54342800-54360600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 11 | chr4:54343000-54385600 | Weak transcription | Fetal Brain Female | brain |
| 12 | chr4:54343200-54376800 | Weak transcription | Brain Anterior Caudate | brain |
| 13 | chr4:54343400-54352200 | Weak transcription | Esophagus | oesophagus |
| 14 | chr4:54343400-54363000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 15 | chr4:54343600-54352600 | Weak transcription | Placenta | Placenta |
| 16 | chr4:54343600-54364600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 17 | chr4:54345600-54352200 | Weak transcription | Fetal Intestine Small | intestine |
| 18 | chr4:54345800-54349800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 19 | chr4:54345800-54351000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 20 | chr4:54345800-54355400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 21 | chr4:54346000-54356400 | Weak transcription | HSMMtube | muscle |
| 22 | chr4:54346400-54374000 | Weak transcription | Right Ventricle | heart |
| 23 | chr4:54346600-54350600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 24 | chr4:54347000-54349800 | Weak transcription | NHEK | skin |
| 25 | chr4:54347200-54351000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 26 | chr4:54347600-54401800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 27 | chr4:54347800-54349600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 28 | chr4:54347800-54349800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 29 | chr4:54347800-54349800 | Weak transcription | Osteobl | bone |
| 30 | chr4:54347800-54351000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 31 | chr4:54347800-54355000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 32 | chr4:54348000-54349800 | Weak transcription | HMEC | breast |
| 33 | chr4:54348000-54353400 | Weak transcription | Pancreas | Pancrea |
| 34 | chr4:54348000-54355600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 35 | chr4:54348000-54362200 | Weak transcription | Fetal Intestine Large | intestine |
| 36 | chr4:54348200-54349800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 37 | chr4:54348200-54359600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 38 | chr4:54349000-54360000 | Weak transcription | Liver | Liver |
